RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PCDHGB3Q9Y5G1 929 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 COMMD10Q9Y6G5 202 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 USF3Q68DE3 2245 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 TRGV5A0A0B4J1U4 118 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ATP6AP2A0A1C7CYW4 349 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CTAGE9A4FU28 777 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CLCA1A8K7I4 914 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 HSPB2A8KAH6 182 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 FAM171A2A8MVW0 826 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 WWP2O00308 870 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 DVL2O14641 736 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ATP6AP2O75787 350 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 GOSR1O95249 250 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 HRGP04196 525 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SERPIND1P05546 499 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 GSNP06396 782 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 RFPL3SP0C7P2 107 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 PAMP19021 973 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CNR1P21554 472 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 BMP5P22003 454 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 HNF4AP41235 474 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 MAGEA6P43360 314 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF136P52737 540 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 WNT3P56703 355 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 HSD17B7P56937 341 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 RAB38P57729 211 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CDK16Q00536 496 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SORDQ00796 357 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 RUNX2Q13950 521 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 DHX34Q14147 1143 aaKnown RBP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 PCBP2Q15366 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ELAVL1Q15717 326 aaKnown RBP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 HSPB2Q16082 182 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ACSF3Q4G176 576 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 TOR1AIP1Q5JTV8 583 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 WLSQ5T9L3 541 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SHEQ5VZ18 495 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 DUPD1Q68J44 220 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF662Q6ZS27 426 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 FAM47EQ6ZV65 393 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CAND1Q86VP6 1230 aaKnown RBP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 LRRC25Q8N386 305 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 FBXW8Q8N3Y1 598 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF321PQ8N8H1 164 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 TNIP2Q8NFZ5 429 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 EEF1AKMT1Q8WVE0 214 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SLC5A11Q8WWX8 675 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF669Q96BR6 464 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SNF8Q96H20 258 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 DIRC2Q96SL1 478 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CSF3RQ99062 836 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CCDC77Q9BR77 488 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CCDC68Q9H2F9 335 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SLC6A15Q9H2J7 730 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 PELI2Q9HAT8 420 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 PROK2Q9HC23 129 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SACM1LQ9NTJ5 587 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 SAMD15Q9P1V8 674 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 CR1P17927 2039 aa6.69□□□□□ -1.34
ATXN3-219ENST00000553488 URADA6NGE7 173 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 CYR61O00622 381 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 HAUS5O94927 633 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 IPO7O95373 1038 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 TBX6O95947 436 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 SERPINA6P08185 405 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 PCSK6P29122 969 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 HNRNPH1P31943 449 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 PIGAP37287 484 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 AP1S2P56377 157 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 NKX6-1P78426 367 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 CCZ1BP86790 482 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 CCZ1P86791 482 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 CRYZQ08257 329 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 SLC10A1Q14973 349 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 CCNG2Q16589 344 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 Q5PR19 223 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 RBM20Q5T481 1227 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 HECTD2Q5U5R9 776 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 ANKRD22Q5VYY1 191 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 UGT3A1Q6NUS8 523 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 PAQR3Q6TCH7 311 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 C4orf22Q6V702 233 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 HSDL2Q6YN16 418 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 SYDE1Q6ZW31 735 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 CLNKQ7Z7G1 428 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 TMEM139Q8IV31 216 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 LMNTD2Q8IXW0 634 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 FAM169BQ8N8A8 192 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 FAM47BQ8NA70 645 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 TRPV3Q8NET8 790 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 OR8K3Q8NH51 312 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 OR14A16Q8NHC5 309 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 LINC01560Q8TB33 94 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 PTPMT1Q8WUK0 201 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 FBXL8Q96CD0 374 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 LINGO1Q96FE5 620 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 SGCZQ96LD1 299 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 TSNARE1Q96NA8 513 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms