RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZNF639Q9UID6 485 aa13.86□□□□□ -0.19
MTHFD1-204ENST00000553405 ERVK-11Q9UQG0 969 aa13.86□□□□□ -0.19
MTHFD1-204ENST00000553405 IGSF10Q6WRI0 2623 aa13.86□□□□□ -0.19
MTHFD1-204ENST00000553405 PIEZO2Q9H5I5 2752 aa13.86□□□□□ -0.19
MTHFD1-204ENST00000553405 ZFYVE26Q68DK2 2539 aa13.86□□□□□ -0.19
MTHFD1-204ENST00000553405 A0A0G2JND7 137 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 GMNCA6NCL1 334 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 UBDO15205 165 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ERAL1O75616 437 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 CEACAM4O75871 244 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 CT62P0C5K7 136 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 IDO1P14902 403 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 PORP16435 677 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 CSNK2A2P19784 350 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 GPX3P22352 226 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 PIK3R1P27986 724 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 PTGER1P34995 402 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 FEN1P39748 380 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 SLC26A5P58743 744 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 CXADRP78310 365 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ACTN3Q08043 901 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 DUSP8Q13202 625 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 GSTA3Q16772 222 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ST3GAL2Q16842 350 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 DEFB109BQ30KR1 87 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 PLAG1Q6DJT9 500 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ACAD11Q709F0 780 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ZNF321PQ8N8H1 164 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ZSCAN1Q8NBB4 408 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ELP5Q8TE02 316 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 PSMF1Q92530 271 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 CIDECQ96AQ7 238 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 TESCQ96BS2 214 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 CATSPER2Q96P56 530 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 TRIM4Q9C037 500 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 SEMA4CQ9C0C4 833 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ZNF160Q9HCG1 818 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 MAT2BQ9NZL9 334 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 PSME2Q9UL46 239 aa13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 COPG1Q9Y678 874 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 SMG1Q96Q15 3661 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-204ENST00000553405 ARGFXA6NJG6 315 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 A8MUA0 341 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 PCSK2P16519 638 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 HPCAL1P37235 193 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 ATP4BP51164 291 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 PLIN5Q00G26 463 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 FUT7Q11130 342 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 CHAF1BQ13112 559 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 LTB4RQ15722 352 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 TBR1Q16650 682 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 PRICKLE4Q2TBC4 344 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 ZNF628Q5EBL2 1059 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 FHL5Q5TD97 284 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 FUNDC1Q8IVP5 155 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 LRRC25Q8N386 305 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 TMEM102Q8N9M5 508 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 SIMC1Q8NDZ2 872 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 C7orf57Q8NEG2 295 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 B3GNT7Q8NFL0 401 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 OR8J2Q8NGG1 315 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 OR9I1Q8NGQ6 314 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 OR14A16Q8NHC5 309 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 ZNF675Q8TD23 568 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 ZNF721Q8TF20 911 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 PPCDCQ96CD2 204 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 AMDHD1Q96NU7 426 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 LPAR4Q99677 370 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 PELOQ9BRX2 385 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 SLC52A3Q9NQ40 469 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 MIEF1Q9NQG6 463 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 PNO1Q9NRX1 252 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 ZIM2Q9NZV7 527 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 ADAM21Q9UKJ8 722 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 MAN2B2Q9Y2E5 1009 aa13.84□□□□□ -0.19
MTHFD1-204ENST00000553405 NSG1A0A0A6YYJ2 146 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 C17orf105B2RV13 164 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 C9JVG2 144 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 PEX12O00623 359 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 SNX3O60493 162 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 DNAJB5O75953 348 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 SERPINA7P05543 415 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ARFIP2P53365 341 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 NME5P56597 212 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 MAP4K2Q12851 820 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.29e-8■■■■■ 28.7
MTHFD1-204ENST00000553405 SPANXN4Q5MJ08 99 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 METTL21CQ5VZV1 264 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 PAOXQ6QHF9 649 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 R3HCC1LQ7Z5L2 792 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 PIGWQ7Z7B1 504 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 CCDC116Q8IYX3 515 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 SAMD14Q8IZD0 417 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM9CQ8IZT9 166 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ARMC10Q8N2F6 343 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 KIF2BQ8N4N8 673 aa13.83□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF615Q8N8J6 731 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms