RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 WBP11Q9Y2W2 641 aaKnown RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF780BQ9Y6R6 833 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 GNG14A0A1W2PPG7 69 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 WASHC1A8K0Z3 465 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 WWP2O00308 870 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 RGS16O15492 202 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 PRKNO60260 465 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 CSNK2A2P19784 350 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 HK2P52789 917 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 ALDH6A1Q02252 535 aaKnown RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 RBPJQ06330 500 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 KRT71Q3SY84 523 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 PIGGQ5H8A4 983 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 SPDYAQ5MJ70 313 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 RNF111Q6ZNA4 994 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 GALNT12Q8IXK2 581 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 DND1Q8IYX4 353 aaKnown RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF321PQ8N8H1 164 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 TCP10LQ8TDR4 215 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 CNPPD1Q9BV87 410 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 SHCBP1LQ9BZQ2 653 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 C12orf65Q9H3J6 166 aaKnown RBP14.23□□□□□ -0.13
SHMT2-204ENST00000553324 CXorf21Q9HAI6 301 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 SEC14L3Q9UDX4 400 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 CES1P1Q9UKY3 287 aa14.23□□□□□ -0.13
SHMT2-204ENST00000553324 SLC28A1O00337 649 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 PCDH7O60245 1069 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 NPHS1O60500 1241 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 RSL1D1O76021 490 aaKnown RBP14.22□□□□□ -0.13
SHMT2-204ENST00000553324 CHEK2O96017 543 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 CPMP14384 443 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 CHN1P15882 459 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 SERPINB5P36952 375 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 ST13P50502 369 aaKnown RBP14.22□□□□□ -0.13
SHMT2-204ENST00000553324 FOXA1P55317 472 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 ERVK-8P63133 956 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 HMGCS1Q01581 520 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 PCLAFQ15004 111 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 IL20RBQ6UXL0 311 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 GFRALQ6UXV0 394 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF227Q86WZ6 799 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 GOLM1Q8NBJ4 401 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 OR7G1Q8NGA0 311 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 SLC22A8Q8TCC7 542 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 UCN3Q969E3 161 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 APIPQ96GX9 242 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 FAM111AQ96PZ2 611 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 KCNA7Q96RP8 456 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 GATA5Q9BWX5 397 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-204ENST00000553324 HES7Q9BYE0 225 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 LIN28AQ9H9Z2 209 aaKnown RBP14.22□□□□□ -0.13
SHMT2-204ENST00000553324 ERVK-19Q9WJR5 959 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 CFL2Q9Y281 166 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 SLC5A6Q9Y289 635 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 SHANK1Q9Y566 2161 aa14.22□□□□□ -0.13
SHMT2-204ENST00000553324 ESPL1Q14674 2120 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 CPAMD8Q8IZJ3 1885 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 A0A1B0GUH1 482 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 AZIN1O14977 448 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 CTIFO43310 598 aaKnown RBP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 SPAG7O75391 227 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 ERAL1O75616 437 aaKnown RBP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 ATP1B1P05026 303 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 FGF4P08620 206 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 ANXA4P09525 319 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 NT5EP21589 574 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 ALDH3A1P30838 453 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 TIA1P31483 386 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 ALDH9A1P49189 494 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 HTR6P50406 440 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 TDGF1P3P51864 188 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 SLC37A1P57057 533 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 BTKQ06187 659 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 SRSF1Q07955 248 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF844Q08AG5 666 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 FUT7Q11130 342 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 MAP4K2Q12851 820 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 BNC2Q6ZN30 1099 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 DGAT2L6Q6ZPD8 337 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 RTL4Q6ZR62 310 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 RNF165Q6ZSG1 346 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 SULF2Q8IWU5 870 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 C9orf40Q8IXQ3 194 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 TAGAPQ8N103 731 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 SSC4DQ8WTU2 575 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 TP53INP1Q96A56 240 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 C11orf24Q96F05 449 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-204ENST00000553324 FRMD6Q96NE9 622 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 GIMAP4Q9NUV9 329 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 UTS2RQ9UKP6 389 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 DLGAP4Q9Y2H0 992 aa14.21□□□□□ -0.13
SHMT2-204ENST00000553324 COL12A1Q99715 3063 aa14.21□□□□□ -0.14
SHMT2-204ENST00000553324 C2orf92A0A1B0GVN3 265 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 CAPN14A8MX76 684 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 HRKO00198 91 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 RGS14O43566 566 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 TYROBPO43914 113 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 PEX1O43933 1283 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms