RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 MTRF1O75570 445 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 HPRP00739 348 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 RPLP0P05388 317 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 TNNI3P19429 210 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 DPP4P27487 766 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ADRA1AP35348 466 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MATKP42679 507 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MTIF2P46199 727 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 RPL27P61353 136 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ITPK1Q13572 414 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 KLF5Q13887 457 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 RFTN1Q14699 578 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 SGSM1Q2NKQ1 1148 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 LRIT3Q3SXY7 679 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ACSF3Q4G176 576 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 DDI2Q5TDH0 399 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF730Q6ZMV8 503 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ASRGL1Q7L266 308 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 CATSPERDQ86XM0 798 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 LINC00518Q8N0U6 118 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MLKLQ8NB16 471 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 OR9Q2Q8NGE9 314 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 GIPC3Q8TF64 312 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 THRSPQ92748 146 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 SLCO2A1Q92959 643 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 GMPPAQ96IJ6 420 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 INPP4AQ96PE3 977 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF300Q96RE9 604 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 NODALQ96S42 347 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF416Q9BWM5 594 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MRPL13Q9BYD1 178 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 NLNQ9BYT8 704 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 DCTPP1Q9H773 170 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 COG4Q9H9E3 785 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 PALMDQ9NP74 551 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 KLHL8Q9P2G9 620 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 P2RX2Q9UBL9 471 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 EXTL2Q9UBQ6 330 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 SLC6A5Q9Y345 797 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MRPS18CQ9Y3D5 142 aaKnown RBP4.31□□□□□ -1.72
SCFD1-209ENST00000553280 CSNK1G3Q9Y6M4 447 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 SMCHD1A6NHR9 2005 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 EME2A4GXA9 379 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 HHLA1C9JL84 531 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 INPP4BO15327 924 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ANXA9O76027 345 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 NDUFA7O95182 113 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 FHP07954 510 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 THRBP10828 461 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 PAICSP22234 425 aaKnown RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 AXLP30530 894 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 MAT2AP31153 395 aaKnown RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ABCE1P61221 599 aaKnown RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 RPS4XP62701 263 aaKnown RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 GNB1P62873 340 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 NAAAQ02083 359 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 RBBP4Q09028 425 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 TMEM41BQ5BJD5 291 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 DCAF12Q5T6F0 453 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 SULT1C3Q6IMI6 304 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 RHBDD2Q6NTF9 364 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 DPY19L2P2Q6ZN68 376 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 Q6ZRP5 223 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 GPR142Q7Z601 462 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ZER1Q7Z7L7 766 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 LCA5Q86VQ0 697 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 TBC1D10CQ8IV04 446 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 CENPLQ8N0S6 344 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 FADS6Q8N9I5 356 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 DDHD1Q8NEL9 900 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 OR10T2Q8NGX3 314 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 OR6F1Q8NGZ6 308 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ATP8B4Q8TF62 1192 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF606Q8WXB4 792 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 MCHR2Q969V1 340 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 PGLYRP2Q96PD5 576 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 F2RL3Q96RI0 385 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 MYCBPQ99417 103 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ERP44Q9BS26 406 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 CLEC7AQ9BXN2 247 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 SLC25A19Q9HC21 320 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 STARD5Q9NSY2 213 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 ATAD3AQ9NVI7 634 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 TEX10Q9NXF1 929 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-209ENST00000553280 TUBGCP4Q9UGJ1 667 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 PROCRQ9UNN8 238 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 FOXJ3Q9UPW0 622 aa4.3□□□□□ -1.72
SCFD1-209ENST00000553280 RNF222A6NCQ9 220 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 TRIM49BA6NDI0 452 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 ERVV-2B6SEH9 535 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 MAPK13O15264 365 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 STK17BO94768 372 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 PCCBP05166 539 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 CA3P07451 260 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 HTR2AP28223 471 aa4.29□□□□□ -1.72
SCFD1-209ENST00000553280 RPL9P32969 192 aaKnown RBP4.29□□□□□ -1.72
SCFD1-209ENST00000553280 OPRL1P41146 370 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms