RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 ATP1A4Q13733 1029 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 MLC1Q15049 377 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 DCAF10Q5QP82 559 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 IRAK1BP1Q5VVH5 260 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 TMEM198Q66K66 360 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 PLAG1Q6DJT9 500 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 LANCL3Q6ZV70 420 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 SHISA5Q8N114 240 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 C8orf44Q96CB5 159 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 CNRIP1Q96F85 164 aaPredicted RBP16.09■□□□□ 0.17
ITGA5-213ENST00000553071 CLMPQ9H6B4 373 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 RYDENQ9NUL5 291 aaKnown RBP16.09■□□□□ 0.17
ITGA5-213ENST00000553071 COPS7AQ9UBW8 275 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 FBXL4Q9UKA2 621 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 PCDHGB4Q9UN71 923 aa16.09■□□□□ 0.17
ITGA5-213ENST00000553071 G3BP2Q9UN86 482 aaKnown RBP16.09■□□□□ 0.17
ITGA5-213ENST00000553071 PPIEQ9UNP9 301 aaKnown RBP16.09■□□□□ 0.17
ITGA5-213ENST00000553071 WASHC1A8K0Z3 465 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 C17orf105B2RV13 164 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 FAM107AO95990 144 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 WT1P19544 449 aaPredicted RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 NT5EP21589 574 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 ITPKBP27987 946 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 S100A3P33764 101 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 KIR3DL1P43629 444 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 MANFP55145 182 aaKnown RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 UFM1P61960 85 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 EEF1A2Q05639 463 aaKnown RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 MAP4K2Q12851 820 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 PCOLCEQ15113 449 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 SPRED3Q2MJR0 410 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 PGS1Q32NB8 556 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 JMJD6Q6NYC1 403 aaPredicted RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 APLFQ8IW19 511 aaPredicted RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 GALNT12Q8IXK2 581 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 KBTBD2Q8IY47 623 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 CCDC116Q8IYX3 515 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 MMP21Q8N119 569 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 CPSF7Q8N684 471 aaKnown RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 KRTCAP2Q8N6L1 136 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 B3GNT7Q8NFL0 401 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 OR7A2PQ8NGA2 310 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 ZNF675Q8TD23 568 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 APOBEC4Q8WW27 367 aaKnown RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 UCN3Q969E3 161 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 IMMP1LQ96LU5 166 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 CCT8L2Q96SF2 557 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 DUSP26Q9BV47 211 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 C5AR2Q9P296 337 aa16.08■□□□□ 0.16
ITGA5-213ENST00000553071 TPRP12270 2363 aaKnown RBP16.08■□□□□ 0.16
ITGA5-213ENST00000553071 IGF2RP11717 2491 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 CHD8Q9HCK8 2581 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 PRSS51A0A1B0GVH4 220 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 A0A1W2PRB8 838 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 FAM234BA2RU67 622 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 TGFBR3LH3BV60 316 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 SLC22A2O15244 555 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 SEC24DO94855 1032 aaPredicted RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 ITGB2P05107 769 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 SERPINA7P05543 415 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 FRKP42685 505 aaPredicted RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 NCBP2P52298 156 aaKnown RBP eCLIP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 EFNA3P52797 238 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 SOX8P57073 446 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 SLC26A5P58743 744 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 DEFB109BQ30KR1 87 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 GKAP1Q5VSY0 366 aaPredicted RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 MSANTD1Q6ZTZ1 278 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 PIGWQ7Z7B1 504 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 OR7G1Q8NGA0 311 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 TSPEARQ8WU66 669 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 PTPMT1Q8WUK0 201 aaPredicted RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 C10orf82Q8WW14 230 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 OR5P2Q8WZ92 322 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 VMP1Q96GC9 406 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 SENP5Q96HI0 755 aaPredicted RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 FBXL20Q96IG2 436 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 AMDHD1Q96NU7 426 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 CXorf21Q9HAI6 301 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 ZNF160Q9HCG1 818 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 MMP25Q9NPA2 562 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 FAM120CQ9NX05 1096 aaKnown RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 CFL2Q9Y281 166 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 ARL2BPQ9Y2Y0 163 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 COPG1Q9Y678 874 aaKnown RBP16.07■□□□□ 0.16
ITGA5-213ENST00000553071 WDFY3Q8IZQ1 3526 aa16.07■□□□□ 0.16
ITGA5-213ENST00000553071 ACACBO00763 2458 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 A8MUA0 341 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 RNASET2O00584 256 aaKnown RBP16.06■□□□□ 0.16
ITGA5-213ENST00000553071 LAMP1P11279 417 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 GPX3P22352 226 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 GPC1P35052 558 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 CLCN2P51788 898 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 POLR2JP52435 117 aaKnown RBP16.06■□□□□ 0.16
ITGA5-213ENST00000553071 NME5P56597 212 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 KCNK10P57789 538 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 CXADRP78310 365 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 BTBD16Q32M84 506 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 VWA5B2Q8N398 1253 aa16.06■□□□□ 0.16
ITGA5-213ENST00000553071 OR1N1Q8NGS0 311 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms