RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZNF57Q68EA5 555 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 METTL2BQ6P1Q9 378 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 PHC2Q8IXK0 858 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 NLGN4YQ8NFZ3 816 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 GATAD2BQ8WXI9 593 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 VOPP1Q96AW1 172 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CCDC120Q96HB5 630 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 MIXL1Q9H2W2 232 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 BTNL2Q9UIR0 455 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 A0A0G2JMP0 313 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 A0A0X1KG70 313 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CASKO14936 926 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 MPZL2O60487 215 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 BCHEP06276 602 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 LHCGRP22888 699 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 PRPH2P23942 346 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 PTSQ03393 145 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 COL9A2Q14055 689 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 PDZD3Q86UT5 571 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 LSRQ86X29 649 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 Q8N402 240 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 WDR20Q8TBZ3 569 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 HCAR2Q8TDS4 363 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 RASSF5Q8WWW0 418 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 PHF21AQ96BD5 680 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 MED30Q96HR3 178 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 SMAD5Q99717 465 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 SORBS1Q9BX66 1292 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 LOC102723532A0A0G2JNH3 316 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 ARHGEF33A8MVX0 844 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 PLOD3O60568 738 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 OR2B3O76000 313 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 NCR1O76036 304 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 IFNA14P01570 189 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 KLK1P06870 262 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 XCR1P46094 333 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 LIM2P55344 173 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 SLC7A9P82251 487 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 DCST1Q5T197 706 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 LIPJQ5W064 366 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 FAM20CQ8IXL6 584 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 TIGD4Q8IY51 512 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 PCNPQ8WW12 178 aaKnown RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 OTUB1Q96FW1 271 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 RNF170Q96K19 258 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 HHIPQ96QV1 700 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 MIEF1Q9NQG6 463 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 MCUBQ9NWR8 336 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 FTSJ1Q9UET6 329 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 ALG5Q9Y673 324 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 ZNF197O14709 1029 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 PLA2G10O15496 165 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 CEBPBP17676 345 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 DDX5P17844 614 aaKnown RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 PTX3P26022 381 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 TIA1P31483 386 aaKnown RBP eCLIP11.74□□□□□ -0.534e-10■■■■■ 30
HDAC7-230ENST00000552960 RPS5P46782 204 aaKnown RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 OR3A3P47888 321 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 MVDP53602 400 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 RHAGQ02094 409 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 HEPACAMQ14CZ8 416 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 P2RY14Q15391 338 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 SEC23BQ15437 767 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 GPR19Q15760 415 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 WSCD2Q2TBF2 565 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 SLC35F1Q5T1Q4 408 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 CEACAM20Q6UY09 585 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 CCDC149Q6ZUS6 474 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 OLIG3Q7RTU3 272 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 GPR155Q7Z3F1 870 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 CCDC28AQ8IWP9 274 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 OR52N2Q8NGI0 321 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 OR4K3Q96R72 315 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 SPATA6Q9NWH7 488 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 LSM7Q9UK45 103 aaKnown RBP11.74□□□□□ -0.53
HDAC7-230ENST00000552960 ANGPT4Q9Y264 503 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 COL6A3P12111 3177 aa11.74□□□□□ -0.53
HDAC7-230ENST00000552960 A0A1W2PRB8 838 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 ZNF8P17098 575 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-230ENST00000552960 VIPR2P41587 438 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
HDAC7-230ENST00000552960 TCEAL5Q5H9L2 206 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 TMEM215Q68D42 235 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 XKRXQ6PP77 449 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 TPRG1Q6ZUI0 275 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 USP45Q70EL2 814 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 VN1R5Q7Z5H4 357 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 OR52P1PQ8NH57 321 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 CREB3L4Q8TEY5 395 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 NEIL2Q969S2 332 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 TMEM159Q96B96 161 aa11.73□□□□□ -0.53
HDAC7-230ENST00000552960 WACQ9BTA9 647 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms