RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 BRWD3Q6RI45 1802 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 PIKFYVEQ9Y2I7 2098 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 RNASET2O00584 256 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 EEF1E1O43324 174 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 IL1AP01583 271 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 XCR1P46094 333 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 ACLYP53396 1101 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 CRYBA2P53672 197 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 WNT4P56705 351 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 TAS2R41P59536 307 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 HSDL2Q6YN16 418 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 ZNF730Q6ZMV8 503 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 ZNF767PQ75MW2 155 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 OR4K5Q8NGD3 323 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 C16orf78Q8WTQ4 265 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 ENAMQ9NRM1 1142 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 TAS2R7Q9NYW3 318 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC25A13Q9UJS0 675 aa11.02□□□□□ -0.65
PPFIA2-227ENST00000552948 EPHX1P07099 455 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 CD70P32970 193 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 RPL3P39023 403 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 LMAN2Q12907 356 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 METTL2BQ6P1Q9 378 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 MTFR2Q6P444 385 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SMARCD3Q6STE5 483 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 UXS1Q8NBZ7 420 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 TM9SF4Q92544 642 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ACOXLQ9NUZ1 547 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PLAGL1Q9UM63 463 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 CCDC88CQ9P219 2028 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 KCNE1BA0A087WTH5 132 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 A8MUA0 341 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 FZD6O60353 706 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 GPR37L1O60883 481 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 GCM2O75603 506 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PDHA2P29803 388 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 NNMTP40261 264 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC6A12P48065 614 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 CDH11P55287 796 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 B4GALNT1Q00973 533 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ADAM15Q13444 863 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 DDX53Q86TM3 631 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 NANOGP1Q8N7R0 232 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 TMEM145Q8NBT3 493 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SMG7Q92540 1137 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 IL17FQ96PD4 163 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 BHLHE41Q9C0J9 482 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 AHSPQ9NZD4 102 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ASF1AQ9Y294 204 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PRR23AA6NEV1 266 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 TEX28O15482 410 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PLA2G10O15496 165 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ATG13O75143 517 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 OR12D1P0DN82 309 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ZNF8P17098 575 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ALAS2P22557 587 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 RRAS2P62070 204 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 POLR2LP62875 67 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ANGPT1Q15389 498 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SEC23BQ15437 767 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 FCN2Q15485 313 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 MLIPQ5VWP3 458 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 FAM92BQ6ZTR7 304 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 CHMP1BQ7LBR1 199 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 TSEN54Q7Z6J9 526 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SAMD12Q8N8I0 201 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 AUTS2Q8WXX7 1259 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SCRN2Q96FV2 425 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 HYLS1Q96M11 299 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 BBS4Q96RK4 519 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 KATNB1Q9BVA0 655 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SMG9Q9H0W8 520 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 MIXL1Q9H2W2 232 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 C12orf4Q9NQ89 552 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 NUDT15Q9NV35 164 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 GLOD5A6NK44 160 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 KPNA3O00505 521 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 FRS3O43559 492 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ELNP15502 786 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 LHCGRP22888 699 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 GABRR2P28476 465 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 EVI2BP34910 448 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 WDR5P61964 334 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 TBPL1P62380 186 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 DSC1Q08554 894 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PLEKHS1Q5SXH7 462 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 MORN1Q5T089 497 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 GRHL2Q6ISB3 625 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 DNAJB7Q7Z6W7 309 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 KLBQ86Z14 1044 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 HORMAD2Q8N7B1 307 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 OR52I1Q8NGK6 324 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 ZCCHC3Q9NUD5 404 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC23A1Q9UHI7 598 aa11.01□□□□□ -0.65
PPFIA2-227ENST00000552948 CLEC4EQ9ULY5 219 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms