RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PRTFDC1Q9NRG1 225 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 C19orf25Q9UFG5 118 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 GIMAP2Q9UG22 337 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ITGB1BP2Q9UKP3 347 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 MKL2Q9ULH7 1088 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 DAPP1Q9UN19 280 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 TRIM33Q9UPN9 1127 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 A0A0A6YYD5 115 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SDHDO14521 159 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 UBDO15205 165 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SCELO95171 688 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 TBX6O95947 436 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 JUNP05412 331 aaKnown RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 IL3P08700 152 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 ZGLP1P0C6A0 271 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SMIM10L1P0DMW3 83 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 ALOX15P16050 662 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 TPP2P29144 1249 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 RPL3P39023 403 aaKnown RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 GCGRP47871 477 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 TAS2R50P59544 299 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 ACTN3Q08043 901 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 TBL3Q12788 808 aaKnown RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SLC9B1Q4ZJI4 515 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 C6orf136Q5SQH8 315 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 NDUFAF5Q5TEU4 345 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 IL23RQ5VWK5 629 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 GDF7Q7Z4P5 450 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SPATA19Q7Z5L4 167 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 UBE3DQ7Z6J8 389 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 LIX1Q8N485 282 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 AMER3Q8N944 861 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 CEP70Q8NHQ1 597 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 CLHC1Q8NHS4 586 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 CHTF18Q8WVB6 975 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 ITLN2Q8WWU7 325 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 RELTQ969Z4 430 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SMIM10Q96HG1 83 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 C3orf30Q96M34 536 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 TSSK3Q96PN8 268 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 SLX1AQ9BQ83 275 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 AICDAQ9GZX7 198 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 WDR55Q9H6Y2 383 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 WDR54Q9H977 334 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 C3orf18Q9UK00 162 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 PSME2Q9UL46 239 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 MAPRE3Q9UPY8 281 aa10.66□□□□□ -0.7
TMEM116-218ENST00000552839 KLF2Q9Y5W3 355 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-218ENST00000552839 C1orf226A1L170 272 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 GMNCA6NCL1 334 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 SYNDIG1LA6NDD5 238 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 E9PBE3 544 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 AKAP10O43572 662 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 DYRK3O43781 588 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 TMPRSS11DO60235 418 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 OR10H2O60403 315 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 PRMT3O60678 531 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 JRKO75564 520 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 ERAL1O75616 437 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 LRATO95237 230 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 AIFM1O95831 613 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 IFNA16P05015 189 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 SNRPB2P08579 225 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 COX7A2P14406 83 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 NCF2P19878 526 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 PIK3R1P27986 724 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 NTSP30990 170 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 PTGER4P35408 488 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 EMP2P54851 167 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 HNRNPH2P55795 449 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 EMX2Q04743 252 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 KLC1Q07866 573 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 C2orf80Q0P641 193 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 RUNX2Q13950 521 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 NKG7Q16617 165 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 SMU1Q2TAY7 513 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 VWA2Q5GFL6 755 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 AGAP7PQ5VUJ5 663 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 B3GNTL1Q67FW5 361 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 FAAH2Q6GMR7 532 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 FAM180AQ6UWF9 173 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 Q6ZSR9 355 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 IKBIPQ70UQ0 350 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 COX15Q7KZN9 410 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 SPATA21Q7Z572 469 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 R3HCC1LQ7Z5L2 792 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 CLNKQ7Z7G1 428 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 ZC3H7AQ8IWR0 971 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 ZNF595Q8IYB9 648 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 ARHGEF39Q8N4T4 335 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 C7orf57Q8NEG2 295 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 ACTRT2Q8TDY3 377 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 C16orf78Q8WTQ4 265 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 GFM2Q969S9 779 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 KLHL29Q96CT2 875 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 PTCHD1Q96NR3 888 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 AGAP4Q96P64 663 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 PRPF18Q99633 342 aaKnown RBP10.65□□□□□ -0.7
TMEM116-218ENST00000552839 TMEM120AQ9BXJ8 343 aa10.65□□□□□ -0.7
TMEM116-218ENST00000552839 DPY30Q9C005 99 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms