RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 A0A1W2PRB8 838 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SLC5A10A0PJK1 596 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PRAMEF27A3QJZ7 478 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FABP12A6NFH5 140 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MANSC4A6NHS7 340 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FAM25AB3EWG3 89 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FAM25CB3EWG5 89 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FAM25GB3EWG6 89 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 H3BN98 237 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 OR10H3O60404 316 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TBX6O95947 436 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ADAP00813 363 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 BCHEP06276 602 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 YES1P07947 543 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SRPRAP08240 638 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TNNI3P19429 210 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 APEX1P27695 318 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PBLDP30039 288 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 IRS1P35568 1242 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 XKP51811 444 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SNRPD1P62314 119 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MLLT11Q13015 90 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ATAT1Q5SQI0 421 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ACSM5Q6NUN0 579 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ERAP2Q6P179 960 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MED27Q6P2C8 311 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 XKRXQ6PP77 449 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FAM92BQ6ZTR7 304 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 GAREM2Q75VX8 874 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 HMGN2P46Q86SG4 172 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 VWA5B2Q8N398 1253 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 CAMKK1Q8N5S9 505 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PCSK9Q8NBP7 692 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ATP6V1C2Q8NEY4 427 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 OR52I1Q8NGK6 324 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 GRPEL2Q8TAA5 225 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FIBINQ8TAL6 211 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SLC7A13Q8TCU3 470 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 UBASH3BQ8TF42 649 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FGF11Q92914 225 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TRIM63Q969Q1 353 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 DIRAS2Q96HU8 199 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 NELL2Q99435 816 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TM9SF2Q99805 663 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FUZQ9BT04 418 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 KATNB1Q9BVA0 655 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 RIOK2Q9BVS4 552 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MND1Q9BWT6 205 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FAM83DQ9H4H8 585 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MTG2Q9H4K7 406 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 C5AR2Q9P296 337 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 CFAP97Q9P2B7 532 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MALT1Q9UDY8 824 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 NDRG2Q9UN36 371 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SSR3Q9UNL2 185 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SF3B6Q9Y3B4 125 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 BACE2Q9Y5Z0 518 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SHISA3A0PJX4 238 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PIPSLA2A3N6 862 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 CCDC182A6NF36 153 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SMLR1H3BR10 107 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 RTCAO00442 366 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 POLR1CO15160 346 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 AKR7A2O43488 359 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TLX2O43763 284 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TMCC2O75069 709 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 CPNE3O75131 537 aaKnown RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 LGI1O95970 557 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FAM157BP0CG42 384 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 OR12D1P0DN82 309 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 MAN2A2P49641 1150 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 DSTNP60981 165 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PIN1Q13526 163 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 P2RY14Q15391 338 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 POM121L1PQ3SYA9 428 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SYT14P1Q58G82 188 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF628Q5EBL2 1059 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 KIAA1841Q6NSI8 718 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 REEP3Q6NUK4 255 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 DEF8Q6ZN54 512 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 USP30Q70CQ3 517 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 SHFQ7M4L6 423 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PDZD3Q86UT5 571 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 KLHDC8AQ8IYD2 350 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ADGRF3Q8IZF5 1079 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 YIPF7Q8N8F6 280 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ZFP41Q8N8Y5 198 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 GDPD1Q8N9F7 314 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 IL17RCQ8NAC3 791 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 OR4M1Q8NGD0 313 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 OR52P1PQ8NH57 321 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 JPH3Q8WXH2 748 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 UCN3Q969E3 161 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 ZBED6CLQ96FA7 236 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-212ENST00000552491 PDXPQ96GD0 296 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TMEM169Q96HH4 297 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 TMEM19Q96HH6 336 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 DHRS1Q96LJ7 313 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 RIPOR3Q96MK2 946 aa5.14□□□□□ -1.59
LIMA1-212ENST00000552491 FRMD6Q96NE9 622 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms