RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CYLC1P35663 651 aaPredicted RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CPOXP36551 454 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 FDFT1P37268 417 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CETN2P41208 172 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CLCN7P51798 805 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 HADHBP55084 474 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 RNF4P78317 190 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 BTN3A2P78410 334 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 SRSF2Q01130 221 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 ASPHQ12797 758 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 SLC13A2Q13183 592 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 RUNX2Q13950 521 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 SF3B4Q15427 424 aaKnown RBP eCLIP4.9□□□□□ -1.634e-8■■■■■ 38.4
HOXB3-213ENST00000552000 ELAVL1Q15717 326 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PHKG1Q16816 387 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PIGGQ5H8A4 983 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TOR1AIP1Q5JTV8 583 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PCID2Q5JVF3 399 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 DCST1Q5T197 706 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 MRNIPQ6NTE8 343 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 C11orf63Q6NUN7 778 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 AGTRAPQ6RW13 159 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 LCTLQ6UWM7 567 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PLXDC2Q6UX71 529 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CYHR1Q6ZMK1 362 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PLEKHM3Q6ZWE6 761 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PRUNE1Q86TP1 453 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 GCNT2Q8N0V5 402 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 LILRB2Q8N423 598 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TBC1D19Q8N5T2 526 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF441Q8N8Z8 693 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 FAM47BQ8NA70 645 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TMEM52Q8NDY8 209 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 FAM13CQ8NE31 585 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 ABHD11Q8NFV4 315 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 OR14A16Q8NHC5 309 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 MBD3L2Q8NHZ7 208 aaPredicted RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PAQR8Q8TEZ7 354 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PTPMT1Q8WUK0 201 aaPredicted RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TMEM171Q8WVE6 324 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 ALG3Q92685 438 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 DAZLQ92904 295 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 INTS12Q96CB8 462 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 RUNDC3BQ96NL0 473 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 WFIKKN1Q96NZ8 548 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 SGPP1Q9BX95 441 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 UGT2B28Q9BY64 529 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 REG4Q9BYZ8 158 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PRDM14Q9GZV8 571 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 AICDAQ9GZX7 198 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CLK4Q9HAZ1 481 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PROK2Q9HC23 129 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 SH2D2AQ9NP31 389 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 QPCTLQ9NXS2 382 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 KLHL28Q9NXS3 571 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 IFNKQ9P0W0 207 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 ZFP69BQ9UJL9 534 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TFR2Q9UP52 801 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 WIF1Q9Y5W5 379 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 A0A096LPE4 126 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 A0A1W2PPZ6 126 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 TCRBV7S2A1N4TA0A589 114 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 ESYT3A0FGR9 886 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 CTAGE9A4FU28 777 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 GOLGA6L9A6NEM1 432 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 URADA6NGE7 173 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 C17orf105B2RV13 164 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 PFDN6O15212 129 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 SOX30O94993 753 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 FAM157CP0CG43 387 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 SMIM10L1P0DMW3 83 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 ENO3P13929 434 aaPredicted RBP4.89□□□□□ -1.63
HOXB3-213ENST00000552000 ETS1P14921 441 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 NPPBP16860 134 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 TNNI3P19429 210 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 CRYGSP22914 178 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 LOXP28300 417 aaPredicted RBP4.89□□□□□ -1.63
HOXB3-213ENST00000552000 AHRP35869 848 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 MC3RP41968 323 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 MAGEA1P43355 309 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 SLCO1A2P46721 670 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 MASP1P48740 699 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 HSD17B7P56937 341 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 RWDD2BP57060 319 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 RAB38P57729 211 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 TPM4P67936 248 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 REEP5Q00765 189 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 FAM27E3Q08E93 113 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 CTBP1Q13363 440 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 RCAN2Q14206 197 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 RBBP5Q15291 538 aaKnown RBP4.89□□□□□ -1.63
HOXB3-213ENST00000552000 CLEC12BQ2HXU8 276 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF791Q3KP31 576 aaPredicted RBP4.89□□□□□ -1.63
HOXB3-213ENST00000552000 EIPR1Q53HC9 387 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 VASNQ6EMK4 673 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 CENPUQ71F23 418 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF550Q7Z398 422 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 LUZP1Q86V48 1076 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 CPNE9Q8IYJ1 553 aa4.89□□□□□ -1.63
HOXB3-213ENST00000552000 PM20D2Q8IYS1 436 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms