RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CD22P20273 847 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 CTSSP25774 331 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 HSPA7P48741 367 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 CHIT1Q13231 466 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 MORF4L2Q15014 288 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 TBCCQ15814 346 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 NTRK2Q16620 822 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 PRAMEF9Q5VWM5 478 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 ST13P4Q8IZP2 240 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 ZNF473Q8WTR7 871 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 DIO2Q92813 273 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 CMTM7Q96FZ5 175 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 TRIB1Q96RU8 372 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 CENPKQ9BS16 269 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 EPB41L4BQ9H329 900 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 ZNF395Q9H8N7 513 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 PHF11Q9UIL8 331 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 DOCK7Q96N67 2140 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 CD8B2A6NJW9 211 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 KDM4EB2RXH2 506 aaPredicted RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 ARHGEF9O43307 516 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 OR10H2O60403 315 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 CCNT2O60583 730 aaKnown RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 SNX4O95219 450 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 IL18BPO95998 194 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 HPNP05981 417 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 PCNAP12004 261 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 MASP1P48740 699 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 RAP1GDS1P52306 607 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 HERVK_113P63132 956 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 ERVK-8P63133 956 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 RPP38P78345 283 aaKnown RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 NKX6-1P78426 367 aaPredicted RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 SLAMF1Q13291 335 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 ZNF267Q14586 743 aaPredicted RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 RPS6KA2Q15349 733 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 SPRED3Q2MJR0 410 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 FBXO48Q5FWF7 155 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 KHDRBS2Q5VWX1 349 aaKnown RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 VASNQ6EMK4 673 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 OR4C11Q6IEV9 310 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 SYDE1Q6ZW31 735 aaPredicted RBP13□□□□□ -0.33
CHMP1A-210ENST00000551981 GPR180Q86V85 440 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 PACS2Q86VP3 889 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 TSPAN17Q96FV3 270 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 ERVK-6Q9BXR3 956 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 RHOJQ9H4E5 214 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 CD274Q9NZQ7 290 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 ERVK-19Q9WJR5 959 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 PPP2R2CQ9Y2T4 447 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 IKBKGQ9Y6K9 419 aa13□□□□□ -0.33
CHMP1A-210ENST00000551981 FN1P02751 2386 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 MBD3L4A6NDZ8 208 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 MBD3L3A6NE82 208 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 MBD3L5A6NJ08 208 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 SAP18O00422 153 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 CES2O00748 559 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 SH3BGRLO75368 114 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ERN1O75460 977 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 TGFB1P01137 390 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 CCDC166P0CW27 439 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 CD53P19397 219 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 GCKP35557 465 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 BUD31P41223 144 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 CASP2P42575 452 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 TMED10P49755 219 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 CDK9P50750 372 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 AGFG1P52594 562 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ARL4CP56559 192 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 SLC37A1P57057 533 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ATP6V0D1P61421 351 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 POU4F1Q01851 419 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 TNFRSF17Q02223 184 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 RCAN2Q14206 197 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 EBPQ15125 230 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 TOMM20Q15388 145 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 NHSL2Q5HYW2 709 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 MED27Q6P2C8 311 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 DGAT2L6Q6ZPD8 337 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 LRRC70Q7Z2Q7 622 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ANKMY2Q8IV38 441 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 LAS2Q8IYD9 372 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 MBD3L2Q8NHZ7 208 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 NUDT8Q8WV74 236 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 RIT1Q92963 219 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ISL2Q96A47 359 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ESAMQ96AP7 390 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 RGMAQ96B86 450 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ARSGQ96EG1 525 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 RILPQ96NA2 401 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 DACH2Q96NX9 599 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 SECISBP2Q96T21 854 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 WDR83Q9BRX9 315 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 DDX47Q9H0S4 455 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 CALHM2Q9HA72 323 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 JKAMPQ9P055 326 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 ADGRE2Q9UHX3 823 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms