RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GJB2P29033 226 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 OR1D2P34982 312 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 NF2P35240 595 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 SLC6A12P48065 614 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 NT5C2P49902 561 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 BTG1P62324 171 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 DRP2Q13474 957 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 GK2Q14410 553 aaPredicted RBP4.16□□□□□ -1.74
LIMA1-205ENST00000550592 SPHARQ15513 63 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 Q6ZVQ6 151 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 MOB2Q70IA6 237 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 NLRP14Q86W24 1093 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 SLC43A2Q8N370 569 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 TRPV3Q8NET8 790 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 OR8H1Q8NGG4 311 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 OR2T6Q8NHC8 308 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 SMPDL3AQ92484 453 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 CCDC47Q96A33 483 aaKnown RBP4.16□□□□□ -1.74
LIMA1-205ENST00000550592 USP28Q96RU2 1077 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 UBAC1Q9BSL1 405 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 NTMT1Q9BV86 223 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 SCRT2Q9NQ03 307 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 TXLNGQ9NUQ3 528 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 BARHL2Q9NY43 387 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 THEGQ9P2T0 379 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 LNPEPQ9UIQ6 1025 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 MOSPD1Q9UJG1 213 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 TDRKHQ9Y2W6 561 aaKnown RBP4.16□□□□□ -1.74
LIMA1-205ENST00000550592 CENPFP49454 3210 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 ATRXP46100 2492 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 COL4A5P29400 1685 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 RAB3GAP2Q9H2M9 1393 aa4.15□□□□□ -1.74
LIMA1-205ENST00000550592 ANKRD26Q9UPS8 1709 aa4.15□□□□□ -1.74
LIMA1-205ENST00000550592 LAMA2P24043 3122 aaKnown RBP4.15□□□□□ -1.74
LIMA1-205ENST00000550592 KDM3BQ7LBC6 1761 aa4.15□□□□□ -1.74
LIMA1-205ENST00000550592 MYO9BQ13459 2157 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 SLC9B1P1A6NJY1 282 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 MPTX1A8MV57 137 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 TCP10L2B9ZVM9 353 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 CHUKO15111 745 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 HTATSF1O43719 755 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 STBD1O95210 358 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 CPNE6O95741 557 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 FGF19O95750 216 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 NUDT17P0C025 328 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 RPS12P25398 132 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 MMP12P39900 470 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 TNFSF10P50591 281 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 MFGE8Q08431 387 aaPredicted RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 TSTA3Q13630 321 aaPredicted RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 GIT2Q14161 759 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 C3AR1Q16581 482 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 STX1AQ16623 288 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 MTHFSDQ2M296 383 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 LYPLAL1Q5VWZ2 237 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 CES4AQ5XG92 561 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 SNRNP48Q6IEG0 339 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 ETFRF1Q6IPR1 90 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 B3GLCTQ6Y288 498 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 FRRS1Q6ZNA5 592 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 Q6ZTC4 211 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 ZER1Q7Z7L7 766 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 ELMOD1Q8N336 334 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 OR5M9Q8NGP3 310 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 C8orf46Q8TAG6 207 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 GANCQ8TET4 914 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 NAF1Q96HR8 494 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 NAP1L3Q99457 506 aaPredicted RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 SSX3Q99909 188 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 FAM213AQ9BRX8 229 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 NUSAP1Q9BXS6 441 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 DGCR6LQ9BY27 220 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 TMEM245Q9H330 911 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF665Q9H7R5 613 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 ZCCHC3Q9NUD5 404 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF319Q9P2F9 582 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 TRIM10Q9UDY6 481 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 IL19Q9UHD0 177 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 TRMT6Q9UJA5 497 aaKnown RBP4.15□□□□□ -1.75
LIMA1-205ENST00000550592 PLCL2Q9UPR0 1127 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 WIPI2Q9Y4P8 454 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 HTTP42858 3142 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 BDP1A6H8Y1 2624 aa4.15□□□□□ -1.75
LIMA1-205ENST00000550592 A0A1W2PP64 1363 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 SLC28A1O00337 649 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 SIGLEC5O15389 551 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 BCAS2O75934 225 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-205ENST00000550592 CXCL14O95715 111 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 CHRNGP07510 517 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 ABHD2P08910 425 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 GSTA2P09210 222 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 FERP16591 822 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 TYMPP19971 482 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 PRKACGP22612 351 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 MT3P25713 68 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 GPR183P32249 361 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 TMEM64Q6YI46 380 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 C3P1Q6ZMU1 363 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 KIF6Q6ZMV9 814 aa4.14□□□□□ -1.75
LIMA1-205ENST00000550592 STHQ8IWL8 128 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms