RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ST3GAL3Q11203 375 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 CRB2Q5IJ48 1285 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 CHERPQ8IWX8 916 aaKnown RBP11.62□□□□□ -0.55
NR4A1-215ENST00000550557 LRRC17Q8N6Y2 441 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 WFDC5Q8TCV5 224 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 MOCOSQ96EN8 888 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 FER1L6-AS2Q96M78 137 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 SMIM14Q96QK8 99 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 SGK494L7N484 410 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 SRPX2O60687 465 aaPredicted RBP11.62□□□□□ -0.55
NR4A1-215ENST00000550557 RAP2AP10114 183 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 ICAM2P13598 275 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 CD46P15529 392 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 TGFBR2P37173 567 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 C14orf28Q4W4Y0 310 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 HSDL2Q6YN16 418 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 C12orf43Q96C57 262 aaKnown RBP11.62□□□□□ -0.55
NR4A1-215ENST00000550557 INSM2Q96T92 566 aaPredicted RBP11.62□□□□□ -0.55
NR4A1-215ENST00000550557 TWSG1Q9GZX9 223 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 CUTCQ9NTM9 273 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 ACTR3BQ9P1U1 418 aa11.62□□□□□ -0.55
NR4A1-215ENST00000550557 CNOT11Q9UKZ1 510 aaKnown RBP11.62□□□□□ -0.55
NR4A1-215ENST00000550557 ACPPP15309 386 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 UQCRC2P22695 453 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 IGFBP6P24592 240 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 NR0B1P51843 470 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 OR2B6P58173 313 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ZNF33BQ06732 778 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 MRPL49Q13405 166 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 CXorf57Q6NSI4 855 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 SYT13Q7L8C5 426 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 FBXL6Q8N531 539 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 PROKR2Q8NFJ6 384 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 MCFD2Q8NI22 146 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 GEMIN6Q8WXD5 167 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 HPS1Q92902 700 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 SFXN2Q96NB2 322 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 NSUN5Q96P11 429 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 MEAF6Q9HAF1 191 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 RASSF1Q9NS23 344 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 FARSBQ9NSD9 589 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 LOC285095A0A1B0GVY8 99 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 H0YJX3 145 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 TFECO14948 347 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 CD2P06729 351 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 BMP8BP34820 402 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 OMPP47874 163 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ACADVLP49748 655 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 HSD11B2P80365 405 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 MED22Q15528 200 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 TMEM52BQ4KMG9 183 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 KCTD11Q693B1 232 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 LCTLQ6UWM7 567 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 TMEM107Q6UX40 140 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 BMP8AQ7Z5Y6 402 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 C1orf210Q8IVY1 113 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 TP53INP1Q96A56 240 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ELF4Q99607 663 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 C14orf105Q9NVL8 296 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 MTCH2Q9Y6C9 303 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 SIPA1L1O43166 1804 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 C17orf105B2RV13 164 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 CLDN25C9JDP6 229 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 RCBTB2O95199 551 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 FADS2O95864 444 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 PPP3R1P63098 170 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 DMPKQ09013 629 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 SEMA3BQ13214 749 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 LIN54Q6MZP7 749 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ADAMTSL4Q6UY14 1074 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 NLGN4YQ8NFZ3 816 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 CAPSLQ8WWF8 208 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ZUFSPQ96AP4 578 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 NODALQ96S42 347 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 NAA11Q9BSU3 229 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 DOHHQ9BU89 302 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 LIPT1Q9Y234 373 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 IFT52Q9Y366 437 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 KIAA1217Q5T5P2 1943 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 A0A1W2PPC1 479 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 TNFRSF10CO14798 259 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 PRAMEF2O60811 474 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 H1F0P07305 194 aaKnown RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 CHRM5P08912 532 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ZNF888P0CJ79 500 aaPredicted RBP11.61□□□□□ -0.55
NR4A1-215ENST00000550557 PDHA2P29803 388 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 SIGLEC14Q08ET2 396 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 PMS2P3Q13401 168 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 SLC2A7Q6PXP3 512 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 BRD7Q9NPI1 651 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ASB6Q9NWX5 421 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 ING3Q9NXR8 418 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 GMEB1Q9Y692 573 aa11.61□□□□□ -0.55
NR4A1-215ENST00000550557 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
NR4A1-215ENST00000550557 C2orf92A0A1B0GVN3 265 aa11.6□□□□□ -0.55
NR4A1-215ENST00000550557 VSTM2BA6NLU5 285 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms