RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 RAB10P61026 200 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PLIN5Q00G26 463 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 MYBPHQ13203 477 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 BIKQ13323 160 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 SLC10A1Q14973 349 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 AP5B1Q2VPB7 878 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF750Q32MQ0 723 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF791Q3KP31 576 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 FBXO48Q5FWF7 155 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PIGGQ5H8A4 983 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 WLSQ5T9L3 541 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 KHDRBS2Q5VWX1 349 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 SLC22A10Q63ZE4 541 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 RTL6Q6ICC9 239 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 MED27Q6P2C8 311 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF585AQ6P3V2 769 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZCCHC7Q8N3Z6 543 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 SLC15A4Q8N697 577 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 OR5M9Q8NGP3 310 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF417Q8TAU3 575 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 STAG3L4Q8TBR4 150 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PAQR8Q8TEZ7 354 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 UBTD2Q8WUN7 234 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 TANKQ92844 425 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 CMTM7Q96FZ5 175 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 FBXL20Q96IG2 436 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 DGAT2Q96PD7 388 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF587Q96SQ5 575 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 KRT12Q99456 494 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 MDFIQ99750 246 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PELOQ9BRX2 385 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 CD244Q9BZW8 370 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ZNF703Q9H7S9 590 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 SH2D2AQ9NP31 389 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.03□□□□□ -1.28
NEK3-201ENST00000550331 TUBA8Q9NY65 449 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 NUDT4Q9NZJ9 180 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 RNF14Q9UBS8 474 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 PHF11Q9UIL8 331 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 BOKQ9UMX3 212 aaPredicted RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 SNX24Q9Y343 169 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 FAM215AQ9Y5M1 114 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 LIPGQ9Y5X9 500 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.03□□□□□ -1.28
NEK3-201ENST00000550331 HEATR5BQ9P2D3 2071 aa7.03□□□□□ -1.28
NEK3-201ENST00000550331 JMJD1CQ15652 2540 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 TRGV5A0A0B4J1U4 118 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 A0A0G2JNJ9 132 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ATP6AP2A0A1C7CYW4 349 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 CCDC189A1A4V9 331 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 K7EPI3 171 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 RTCAO00442 366 aaKnown RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 FGF17O60258 216 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 KERAO60938 352 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ATP6AP2O75787 350 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 PIAS1O75925 651 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ZWINTO95229 277 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 TGFB1P01137 390 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 C1QAP02745 245 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 CELA3AP09093 270 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 GSTA2P09210 222 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 SLC35E2BP0CK96 405 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 PCNAP12004 261 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 TLX1P31314 330 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 SPRP35270 261 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 PIGAP37287 484 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 PEX19P40855 299 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 PIK3CBP42338 1070 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 IST1P53990 364 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 GNG11P61952 73 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 KCNJ2P63252 427 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 TNFRSF17Q02223 184 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ID2Q02363 134 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 TNP2Q05952 138 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ASPHQ12797 758 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 CALCOCO2Q13137 446 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 SPRED3Q2MJR0 410 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 SLC25A35Q3KQZ1 300 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 C1orf185Q5T7R7 199 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 RIPPLY2Q5TAB7 128 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 DEPDC1Q5TB30 811 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 GRTP1Q5TC63 336 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 GRHL2Q6ISB3 625 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ISCA2Q86U28 154 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 C9orf40Q8IXQ3 194 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 ST13P4Q8IZP2 240 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 FBXW8Q8N3Y1 598 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 OR7G3Q8NG95 312 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 OR10Q1Q8NGQ4 319 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 SREK1Q8WXA9 508 aaKnown RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 NRGNQ92686 78 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 NINJ1Q92982 152 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 EXT2Q93063 718 aa7.02□□□□□ -1.29
NEK3-201ENST00000550331 SPACA9Q96E40 222 aaPredicted RBP7.02□□□□□ -1.29
NEK3-201ENST00000550331 RBM18Q96H35 190 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms