RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 C9orf40Q8IXQ3 194 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF321PQ8N8H1 164 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR4K14Q8NGD5 310 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 LILRB4Q8NHJ6 448 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PAQR8Q8TEZ7 354 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 CHTF18Q8WVB6 975 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 IFT81Q8WYA0 676 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 MTBPQ96DY7 904 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PHF21BQ96EK2 531 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 C14orf79Q96F83 325 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 C16orf45Q96MC5 204 aaPredicted RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 SMC6Q96SB8 1091 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PAFAH2Q99487 392 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 CNPPD1Q9BV87 410 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 SORBS1Q9BX66 1292 aaKnown RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF717Q9BY31 904 aaPredicted RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ENKD1Q9H0I2 346 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 MRPL46Q9H2W6 279 aaKnown RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ELOVL6Q9H5J4 265 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 LDAHQ9H6V9 325 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 KCNJ16Q9NPI9 418 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 B4GALT7Q9UBV7 327 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PSME2Q9UL46 239 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 SNX6Q9UNH7 406 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 CFL2Q9Y281 166 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PCDHGB3Q9Y5G1 929 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PKDREJQ9NTG1 2253 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ABCA12Q86UK0 2595 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 C2orf92A0A1B0GVN3 265 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 NPIPA2E9PIF3 369 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 NPIPA3F8WFD2 350 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR7A17O14581 309 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 TMPRSS11DO60235 418 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 WDR1O75083 606 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 CDH16O75309 829 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 EEDO75530 441 aaKnown RBP10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 AIFM1O95831 613 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 SNRPAP09012 282 aaKnown RBP10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 FBXO45P0C2W1 286 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 GABRA1P14867 456 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 TAC1P20366 129 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ACVR2AP27037 513 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 MAN2A2P49641 1150 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 TMED10P49755 219 aaKnown RBP10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 NRG3P56975 720 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC37A1P57057 533 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 HERVK_113P63132 956 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ERVK-8P63133 956 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 KCNJ2P63252 427 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 FOXO1Q12778 655 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 SF3B4Q15427 424 aaKnown RBP eCLIP10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 CCNYL2Q5T2Q4 361 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 WLSQ5T9L3 541 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 C3P1Q6ZMU1 363 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 GALNT12Q8IXK2 581 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 PLD6Q8N2A8 252 aaKnown RBP10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 FBXW8Q8N3Y1 598 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 TMEM251Q8N6I4 163 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 C17orf47Q8NEP4 570 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR7G1Q8NGA0 311 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR5M3Q8NGP4 307 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF592Q92610 1267 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 GAL3ST4Q96RP7 486 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 SECISBP2Q96T21 854 aaKnown RBP10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 C1QTNF3Q9BXJ4 246 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 TRIM8Q9BZR9 551 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 WWTR1Q9GZV5 400 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 EXO5Q9H790 373 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 CXorf21Q9HAI6 301 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 BRF2Q9HAW0 419 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 SH2D2AQ9NP31 389 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZFP64Q9NPA5 681 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ACKR4Q9NPB9 350 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 XPR1Q9UBH6 696 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 PCTPQ9UKL6 214 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ACAD8Q9UKU7 415 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 ERVK-19Q9WJR5 959 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 GTF3C1Q12789 2109 aa10.04□□□□□ -0.8
VTI1BP3-201ENST00000550220 TRGV5A0A0B4J1U4 118 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 ATP6AP2A0A1C7CYW4 349 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 C1orf226A1L170 272 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 PINLYPA6NC86 204 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 LRRC14BA6NHZ5 514 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 GOLGA6L10A6NI86 522 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 GLOD5A6NK44 160 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 POC1B-GALNT4F8VUJ3 575 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 ATP6AP2O75787 350 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 SNX4O95219 450 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 KLK1P06870 262 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 SNRPB2P08579 225 aaKnown RBP10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 ABHD2P08910 425 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 CCL3P10147 92 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 HSD3B1P14060 373 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 HSD3B2P26439 372 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 DEKP35659 375 aaKnown RBP10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 DNASE1L1P49184 302 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 XKP51811 444 aa10.03□□□□□ -0.8
VTI1BP3-201ENST00000550220 MAPK12P53778 367 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms