RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MYO9AB2RTY4 2548 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 SLCO1B7G3V0H7 640 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 ZNF195O14628 629 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 TFECO14948 347 aaPredicted RBP12.49□□□□□ -0.41
NUP188-211ENST00000550219 ASNA1O43681 348 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CDC40O60508 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUP188-211ENST00000550219 ULK1O75385 1050 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CRCPO75575 148 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CLEC3AO75596 197 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 TGDSO95455 350 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 SMIM10L1P0DMW3 83 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 PPP2R1BP30154 601 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
NUP188-211ENST00000550219 MEOX1P50221 254 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 HTR6P50406 440 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 NEK2P51955 445 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 IFT88Q13099 833 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 ZNF630Q2M218 657 aaPredicted RBP12.49□□□□□ -0.41
NUP188-211ENST00000550219 KRTCAP3Q53RY4 240 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 SIAH3Q8IW03 269 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CYP4Z2PQ8N1L4 340 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 B3GNT7Q8NFL0 401 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 TWIST2Q8WVJ9 160 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 SMIM10Q96HG1 83 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CCT7Q99832 543 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 ELOVL6Q9H5J4 265 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
NUP188-211ENST00000550219 BRF2Q9HAW0 419 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 DMRT3Q9NQL9 472 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
NUP188-211ENST00000550219 VTI1BQ9UEU0 232 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 MEMO1Q9Y316 297 aa12.49□□□□□ -0.41
NUP188-211ENST00000550219 ANKDD1BA6NHY2 528 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 NPIPB8E9PQR5 432 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 HDAC3O15379 428 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 B3GALT2O43825 422 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 SHOX2O60902 331 aaPredicted RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 CHEK2O96017 543 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 PDYNP01213 254 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 PCNAP12004 261 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 HSD3B1P14060 373 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 ALOX15P16050 662 aaPredicted RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 HSD3B2P26439 372 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 CERS1P27544 350 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 PTGER1P34995 402 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 HLCSP50747 726 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 CLCN2P51788 898 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 HNRNPFP52597 415 aaKnown RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 PLA2G16P53816 162 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 GPR85P60893 370 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 GNGT1P63211 74 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 SLC13A2Q13183 592 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 RUNX2Q13950 521 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 CDSNQ15517 529 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 ADPRMQ3LIE5 342 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 XKR7Q5GH72 579 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 RNFT1Q5M7Z0 435 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 TRIM40Q6P9F5 258 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 XKRXQ6PP77 449 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 Q6ZPB1 254 aaPredicted RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 ZNF227Q86WZ6 799 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 WDR75Q8IWA0 830 aaKnown RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 GBP7Q8N8V2 638 aaPredicted RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 TMEM52Q8NDY8 209 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 AGR3Q8TD06 166 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 SELENOMQ8WWX9 145 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 NCLNQ969V3 563 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 MS4A8Q9BY19 250 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 CLK4Q9HAZ1 481 aaKnown RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
NUP188-211ENST00000550219 MMACHCQ9Y4U1 282 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
NUP188-211ENST00000550219 A0A088AWK7 358 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 MYOCOSA0A1B0GUC4 107 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 TGFBR3LH3BV60 316 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 C19orf84I3L1E1 186 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 PRRG2O14669 202 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 ITGA10O75578 1167 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 CLDN14O95500 239 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 JUNP05412 331 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 TPOP07202 933 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 VIMP08670 466 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 ZNF10P21506 573 aaPredicted RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 PTX3P26022 381 aaPredicted RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 PTGER4P35408 488 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 RAB38P57729 211 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 RPS13P62277 151 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 PHEXP78562 749 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 BTKQ06187 659 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 CSTF3Q12996 717 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 CUL3Q13618 768 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms