RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 DOK4Q8TEW6 326 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 ROBO4Q8WZ75 1007 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 CCT6BQ92526 530 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 UCN3Q969E3 161 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 PPWD1Q96BP3 646 aaKnown RBP8.09□□□□□ -1.11
UBE2N-203ENST00000549490 LINGO1Q96FE5 620 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 GAL3ST4Q96RP7 486 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 NDNQ99608 321 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 TRIM54Q9BYV2 358 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 FRMD8P1Q9BZ68 369 aaPredicted RBP8.09□□□□□ -1.11
UBE2N-203ENST00000549490 REXO4Q9GZR2 422 aaKnown RBP8.09□□□□□ -1.11
UBE2N-203ENST00000549490 WWTR1Q9GZV5 400 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 OPN3Q9H1Y3 402 aaPredicted RBP8.09□□□□□ -1.11
UBE2N-203ENST00000549490 FBXO5Q9UKT4 447 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 SLC22A14Q9Y267 594 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 MAD1L1Q9Y6D9 718 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 KCNE2Q9Y6J6 123 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 DOCK7Q96N67 2140 aa8.09□□□□□ -1.11
UBE2N-203ENST00000549490 RAI1Q7Z5J4 1906 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 ZCWPW2A0A1B0GU75 182 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 MIF4GDA9UHW6 222 aaKnown RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 GOLGA6L22H0YM25 854 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 OVOL3O00110 214 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 GNB5O14775 395 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 HS3ST1O14792 307 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SPRY1O43609 319 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 FGF17O60258 216 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 GPRIN2O60269 458 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CLEC3AO75596 197 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 THBDP07204 575 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 C1GALT1C1LP0DN25 315 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 POU2F1P14859 743 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CHMP24386 653 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 THBS2P35442 1172 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 ACVR1BP36896 505 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CASP3P42574 277 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CDKN2DP55273 166 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 RPS4XP62701 263 aaKnown RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 IGLV3-21P80748 117 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CDK16Q00536 496 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 OCRLQ01968 901 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 EBPQ15125 230 aaKnown RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 RPS6KA2Q15349 733 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 KCTD19Q17RG1 926 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 BEX5Q5H9J7 111 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CASC4Q6P4E1 433 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TRIM40Q6P9F5 258 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 VWA1Q6PCB0 445 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TMIGD1Q6UXZ0 262 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SLCO4C1Q6ZQN7 724 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SLC29A4Q7RTT9 530 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 GRAMD2AQ8IUY3 354 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CCDC170Q8IYT3 715 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CNEP1R1Q8N9A8 125 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TTLQ8NG68 377 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 ZNF669Q96BR6 464 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 CTHRC1Q96CG8 243 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 PGM2Q96G03 612 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 FBXL20Q96IG2 436 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 ART5Q96L15 291 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 DGAT2Q96PD7 388 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 MAPKAP1Q9BPZ7 522 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SLC39A3Q9BRY0 314 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 BEX2Q9BXY8 128 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 PLA2G12AQ9BZM1 189 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SLCO5A1Q9H2Y9 848 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 COPS7BQ9H9Q2 264 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 LRTM1Q9HBL6 345 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 LYRM4Q9HD34 91 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 PRDM7Q9NQW5 492 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 RYDENQ9NUL5 291 aaKnown RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TEX10Q9NXF1 929 aaPredicted RBP8.08□□□□□ -1.12
UBE2N-203ENST00000549490 ELOVL5Q9NYP7 299 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TAS2R13Q9NYV9 303 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 WWOXQ9NZC7 414 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 MAPRE3Q9UPY8 281 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 LAMP3Q9UQV4 416 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 DTX4Q9Y2E6 619 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TGP01266 2768 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
UBE2N-203ENST00000549490 MED12Q93074 2177 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 IQANK1A0A1B0GTG1 560 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 PABPN1LA6NDY0 278 aaKnown RBP8.07□□□□□ -1.12
UBE2N-203ENST00000549490 FRG2CA6NGY1 282 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 CAPN14A8MX76 684 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 PLOD2O00469 737 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 DYRK3O43781 588 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 H2AFYO75367 372 aaKnown RBP8.07□□□□□ -1.12
UBE2N-203ENST00000549490 SIX3O95343 332 aaPredicted RBP8.07□□□□□ -1.12
UBE2N-203ENST00000549490 FTCDO95954 541 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 CRHP06850 196 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 TPSB2P20231 275 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 GCKP35557 465 aa8.07□□□□□ -1.12
UBE2N-203ENST00000549490 KIR2DL2P43627 348 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms