RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 AHRRA9YTQ3 701 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 DVL2O14641 736 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 PROM1O43490 865 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 KERAO60938 352 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 GPR75O95800 540 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 EPB42P16452 691 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 SSTR1P30872 391 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 SPRP35270 261 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-218ENST00000548945 PAFAH1B1P43034 410 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ASCL1P50553 236 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 RAP1GDS1P52306 607 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 SLC37A1P57057 533 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 NTRK2Q16620 822 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 GRTP1Q5TC63 336 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 RNF111Q6ZNA4 994 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 CAPN12Q6ZSI9 719 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ISCA2Q86U28 154 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 TGIF2LYQ8IUE0 185 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 OR4N5Q8IXE1 308 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ZZZ3Q8IYH5 903 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 LIX1Q8N485 282 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 OR10G3Q8NGC4 313 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 HUS1BQ8NHY5 278 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 FAM222BQ8WU58 562 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 NRGNQ92686 78 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ATOH8Q96SQ7 321 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 WWTR1Q9GZV5 400 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-218ENST00000548945 OR51B5Q9H339 312 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ALG9Q9H6U8 611 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 PRM3Q9NNZ6 103 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 RASSF1Q9NS23 344 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 CCM2LQ9NUG4 571 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ZNF358Q9NW07 568 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 ALKBH4Q9NXW9 302 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 WHRNQ9P202 907 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 FOXD3Q9UJU5 478 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-218ENST00000548945 CNOT11Q9UKZ1 510 aaKnown RBP11.82□□□□□ -0.52
PTCH1-218ENST00000548945 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 PCDHGA11Q9Y5H2 935 aa11.82□□□□□ -0.52
PTCH1-218ENST00000548945 CAPN14A8MX76 684 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 HRKO00198 91 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SAP18O00422 153 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 PLPP1O14494 284 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 TP53I11O14683 189 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 UGDHO60701 494 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SH3BGRLO75368 114 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 TRIM3O75382 744 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 EPPINO95925 133 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 C1QAP02745 245 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SLC35E2BP0CK96 405 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 PTX3P26022 381 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 CRABP2P29373 138 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 CEACAM8P31997 349 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 TIMP3P35625 211 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 HERVK_113P63132 956 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 ERVK-8P63133 956 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 CALCOCO2Q13137 446 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 EBPQ15125 230 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SF3B4Q15427 424 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 FLYWCH1Q4VC44 716 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 PRAMEF20Q5VT98 475 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 LIPJQ5W064 366 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 MRM1Q6IN84 353 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 DGAT2L6Q6ZPD8 337 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 C3orf62Q6ZUJ4 267 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 CCDC91Q7Z6B0 441 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 TBC1D1Q86TI0 1168 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 LACC1Q8IV20 430 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 TAGAPQ8N103 731 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 FAM13CQ8NE31 585 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 RHEBL1Q8TAI7 183 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 RIT1Q92963 219 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 EXT2Q93063 718 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 RNASE6Q93091 150 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 TP53INP1Q96A56 240 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 PPWD1Q96BP3 646 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 RMND5BQ96G75 393 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 ZNF597Q96LX8 424 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 ALPK1Q96QP1 1244 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SECISBP2Q96T21 854 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 DOHHQ9BU89 302 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 ERVK-6Q9BXR3 956 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 DDX31Q9H8H2 851 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 SAYSD1Q9NPB0 183 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 DMRT3Q9NQL9 472 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 LYARQ9NX58 379 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 PSD3Q9NYI0 1048 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 CRIM1Q9NZV1 1036 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 ZNF629Q9UEG4 869 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 MTRF1LQ9UGC7 380 aaKnown RBP11.81□□□□□ -0.52
PTCH1-218ENST00000548945 ERVK-19Q9WJR5 959 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 MED12Q93074 2177 aa11.81□□□□□ -0.52
PTCH1-218ENST00000548945 A6NNC1 897 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SYCE1LA8MT33 242 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SUPT3HB4E1H0 165 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms