RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PROKR2Q8NFJ6 384 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR52I1Q8NGK6 324 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR8J1Q8NGP2 316 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 CREB3L4Q8TEY5 395 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 UBASH3BQ8TF42 649 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 UCN3Q969E3 161 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZFYVE19Q96K21 471 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 FAM83CQ9BQN1 747 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 MGAT4BQ9UQ53 548 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SPIN1Q9Y657 262 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 CCDC182A6NF36 153 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TGM5O43548 720 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TYRP14679 529 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 PTGER1P34995 402 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 CCR2P41597 374 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 WDR5P61964 334 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SP3Q02447 781 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 MLLT11Q13015 90 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 C1DQ13901 141 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SPDYE7PQ495Y7 208 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 ACSM5Q6NUN0 579 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 GDPGP1Q6ZNW5 385 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR9A1PQ8NGU1 263 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 WDR34Q96EX3 536 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 LRR1Q96L50 414 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 WDFY2Q96P53 400 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TM9SF2Q99805 663 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TOR4AQ9NXH8 423 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMEM98Q9Y2Y6 226 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 PRKAB1Q9Y478 270 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 IQCMA0A1B0GVH7 501 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 HMX3A6NHT5 357 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 PLPP1O14494 284 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 NDUFB5O43674 189 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 NME6O75414 186 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 RPS25P62851 125 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SYPL1Q16563 259 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 PYDC2Q56P42 97 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SYT14P1Q58G82 188 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 PDZK1Q5T2W1 519 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 PODNL1Q6PEZ8 512 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 LIPIQ6XZB0 460 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SHFQ7M4L6 423 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 C6orf120Q7Z4R8 191 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 LRRC56Q8IYG6 542 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZFP41Q8N8Y5 198 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 VN1R2Q8NFZ6 395 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR5D16Q8NGK9 328 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 GATAD2BQ8WXI9 593 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 EXOSC8Q96B26 276 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZNF558Q96NG5 402 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 F2RL3Q96RI0 385 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 GPA33Q99795 319 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC22A4Q9H015 551 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 RACGAP1Q9H0H5 632 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 MALT1Q9UDY8 824 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SRRDQ9UH36 339 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 NDOR1Q9UHB4 597 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SNX7Q9UNH6 387 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC35F4A4IF30 521 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 B4DXG7 233 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 WASH3PC4AMC7 463 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 QSOX1O00391 747 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 HMGN4O00479 90 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 FAAHO00519 579 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SCO2O43819 266 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 INHAP05111 366 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 TSPAN19P0C672 248 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 PNLIPRP1P54315 467 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZNF658BQ4V348 819 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 UNC5DQ6UXZ4 953 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC9B2Q86UD5 537 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC7A6Q92536 515 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 RNF170Q96K19 258 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 SEC14L3Q9UDX4 400 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 HCN2Q9UL51 889 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 ABT1Q9ULW3 272 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 DNMT3AQ9Y6K1 912 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 DNAH14Q0VDD8 3507 aa13.4□□□□□ -0.26
RAPGEF3-218ENST00000548919 PRAMEF27A3QJZ7 478 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 SLC28A2O43868 658 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 GPC1P35052 558 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 IRS1P35568 1242 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 MAPK12P53778 367 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 NFE2L1Q14494 772 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 GINS1Q14691 196 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 PAMR1Q6UXH9 720 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 CD99L2Q8TCZ2 262 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 TM9SF4Q92544 642 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 MTERF3Q96E29 417 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
RAPGEF3-218ENST00000548919 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms