RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TUBB6Q9BUF5 446 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 SLAMF7Q9NQ25 335 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 PNO1Q9NRX1 252 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 SH3BP4Q9P0V3 963 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 PPIEQ9UNP9 301 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 POLHQ9Y253 713 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 ACACBO00763 2458 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 DMXL2Q8TDJ6 3036 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 SAGE2PA6NJ88 616 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 PDPK1O15530 556 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 SLC22A3O75751 556 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 SEC24DO94855 1032 aaPredicted RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 ZFP36L2P47974 494 aaKnown RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 STX1BP61266 288 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 VAC14Q08AM6 782 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 SQLEQ14534 574 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 DPY19L1Q2PZI1 675 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 MTERF4Q7Z6M4 381 aaKnown RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 GLB1L3Q8NCI6 653 aaPredicted RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 NFAM1Q8NET5 270 aaPredicted RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 OR8J2Q8NGG1 315 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 PPWD1Q96BP3 646 aaKnown RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 CNTNAP3BQ96NU0 1288 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 CNTNAP3Q9BZ76 1288 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 BHLHE41Q9C0J9 482 aaPredicted RBP19.7■□□□□ 0.74
CACNB3-210ENST00000548874 RABEP2Q9H5N1 569 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 ATAD3AQ9NVI7 634 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 CELSR3Q9NYQ7 3312 aa19.7■□□□□ 0.74
CACNB3-210ENST00000548874 NSG1A0A0A6YYJ2 146 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 A8MUA0 341 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 OR10H2O60403 315 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 NCF2P19878 526 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 NTSP30990 170 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 SRSF11Q05519 484 aaKnown RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 SPRED3Q2MJR0 410 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 DCAF10Q5QP82 559 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 PAOXQ6QHF9 649 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 CCDC116Q8IYX3 515 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 CPSF7Q8N684 471 aaKnown RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 NATD1Q8N6N6 113 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 OR9I1Q8NGQ6 314 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 OR14A16Q8NHC5 309 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 DAZLQ92904 295 aaKnown RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 CIDECQ96AQ7 238 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 AMDHD1Q96NU7 426 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 BBS4Q96RK4 519 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 CCT8L2Q96SF2 557 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 CXorf21Q9HAI6 301 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 ACSS1Q9NUB1 689 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 TMEM45AQ9NWC5 275 aa19.69■□□□□ 0.74
CACNB3-210ENST00000548874 ANKRD11Q6UB99 2663 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-210ENST00000548874 C17orf105B2RV13 164 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 FAM107AO95990 144 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 MPIP34949 423 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 SOX18P35713 384 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 GPR143P51810 404 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 WNT3P56703 355 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 SLC26A5P58743 744 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 PHC1P78364 1004 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 MGAT2Q10469 447 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 PRICKLE4Q2TBC4 344 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 SPANXN4Q5MJ08 99 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 PLAG1Q6DJT9 500 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 TMEM102Q8N9M5 508 aaPredicted RBP19.68■□□□□ 0.74
CACNB3-210ENST00000548874 ZNF675Q8TD23 568 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 RIT1Q92963 219 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 FER1L6-AS2Q96M78 137 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 ZBTB18Q99592 522 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 DUSP26Q9BV47 211 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 GLIPR2Q9H4G4 154 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 ZNF160Q9HCG1 818 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 MAN2B2Q9Y2E5 1009 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 CLCA3PQ9Y6N3 262 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 PTPRQQ9UMZ3 2332 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 CROCCQ5TZA2 2017 aa19.68■□□□□ 0.74
CACNB3-210ENST00000548874 TPRP12270 2363 aaKnown RBP19.68■□□□□ 0.74
CACNB3-210ENST00000548874 C9JVG2 144 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 MASP2O00187 686 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 SCN2BO60939 215 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 DDAH2O95865 285 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 TNNI3P19429 210 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 NT5EP21589 574 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 KIR3DL1P43629 444 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 NCBP2P52298 156 aaKnown RBP eCLIP19.67■□□□□ 0.74
CACNB3-210ENST00000548874 MAP4K2Q12851 820 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 MLC1Q15049 377 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 LTB4RQ15722 352 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 EXT1Q16394 746 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 PGS1Q32NB8 556 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 FAM174BQ3ZCQ3 159 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 OR4F3Q6IEY1 312 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 FUNDC1Q8IVP5 155 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 GALNT12Q8IXK2 581 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 AMER2Q8N7J2 671 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 MORN4Q8NDC4 146 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 B3GNT7Q8NFL0 401 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 OR9A2Q8NGT5 310 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 CTHRC1Q96CG8 243 aa19.67■□□□□ 0.74
CACNB3-210ENST00000548874 ZBED6CLQ96FA7 236 aaPredicted RBP19.67■□□□□ 0.74
CACNB3-210ENST00000548874 SAR1AQ9NR31 198 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms