RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 RHAGQ02094 409 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 CAPRIN1Q14444 709 aaKnown RBP26.99■■□□□ 1.91
BRF1-213ENST00000548421 NKG7Q16617 165 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 DNAL1Q4LDG9 190 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 C8orf82Q6P1X6 216 aaPredicted RBP26.99■■□□□ 1.91
BRF1-213ENST00000548421 FAM198BQ6UWH4 519 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 ZNF621Q6ZSS3 439 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 PRSS58Q8IYP2 241 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 C7orf57Q8NEG2 295 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 PSMA8Q8TAA3 256 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 SLC46A1Q96NT5 459 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 CGREF1Q99674 301 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 SLC39A3Q9BRY0 314 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 WDR54Q9H977 334 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 SLC6A13Q9NSD5 602 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 VAPAQ9P0L0 249 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 PADI1Q9ULC6 663 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 MKL2Q9ULH7 1088 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 TRBV5-3A0A0A0MS03 114 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 ATP1B1P05026 303 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 ZCCHC18P0CG32 403 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 SLC35E2P0CK97 266 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 GPC1P35052 558 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 SERTAD2Q14140 314 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 CPZQ66K79 652 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 FAM199XQ6PEV8 388 aaPredicted RBP26.98■■□□□ 1.91
BRF1-213ENST00000548421 DEFB107AQ8IZN7 70 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 TRIML2Q8N7C3 387 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 PHF12Q96QT6 1004 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 GPATCH1Q9BRR8 931 aaKnown RBP26.98■■□□□ 1.91
BRF1-213ENST00000548421 ALOXE3Q9BYJ1 711 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 VN1R1Q9GZP7 353 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 NECTIN3Q9NQS3 549 aa26.98■■□□□ 1.91
BRF1-213ENST00000548421 NXT1Q9UKK6 140 aaKnown RBP26.98■■□□□ 1.91
BRF1-213ENST00000548421 RBMS1P29558 406 aaKnown RBP26.97■■□□□ 1.91
BRF1-213ENST00000548421 PSME3P61289 254 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 MAP7Q14244 749 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 GTDC1Q4AE62 458 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 TIPARPQ7Z3E1 657 aaKnown RBP26.97■■□□□ 1.91
BRF1-213ENST00000548421 LAPTM4BQ86VI4 370 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 MSRB3Q8IXL7 192 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 ST13P4Q8IZP2 240 aaPredicted RBP26.97■■□□□ 1.91
BRF1-213ENST00000548421 OR9A2Q8NGT5 310 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 SLC25A37Q9NYZ2 338 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP26.97■■□□□ 1.91
BRF1-213ENST00000548421 NEUROG3Q9Y4Z2 214 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 PCDHGA7Q9Y5G6 932 aa26.97■■□□□ 1.91
BRF1-213ENST00000548421 IGKV3D-11A0A0A0MRZ8 115 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 MYOCOSA0A1B0GUC4 107 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 OR10H2O60403 315 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 CDK9P50750 372 aaKnown RBP26.96■■□□□ 1.91
BRF1-213ENST00000548421 GAB1Q13480 694 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 NCF4Q15080 339 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 IGF2-ASQ6U949 168 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 ASRGL1Q7L266 308 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 ESX1Q8N693 406 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 ANKRD27Q96NW4 1050 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 SPSB2Q99619 263 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 PELOQ9BRX2 385 aaKnown RBP26.96■■□□□ 1.91
BRF1-213ENST00000548421 SOX17Q9H6I2 414 aaPredicted RBP26.96■■□□□ 1.91
BRF1-213ENST00000548421 CXorf36Q9H7Y0 433 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 SEMA3GQ9NS98 782 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 SIRT3Q9NTG7 399 aaPredicted RBP26.96■■□□□ 1.91
BRF1-213ENST00000548421 SNX8Q9Y5X2 465 aa26.96■■□□□ 1.91
BRF1-213ENST00000548421 C15orf38-AP3S2A0A0A6YYH1 394 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 SYNDIG1LA6NDD5 238 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 CNOT3O75175 753 aaKnown RBP26.95■■□□□ 1.91
BRF1-213ENST00000548421 RECKO95980 971 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 SLC5A2P31639 672 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 SOAT1P35610 550 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 SHISA6Q6ZSJ9 500 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 ARPINQ7Z6K5 226 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 PLPP5Q8NEB5 264 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 TSLPQ969D9 159 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 RBM18Q96H35 190 aaKnown RBP26.95■■□□□ 1.91
BRF1-213ENST00000548421 DGAT2Q96PD7 388 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 TRIM4Q9C037 500 aa26.95■■□□□ 1.91
BRF1-213ENST00000548421 SLITRK5O94991 958 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 HEXBP07686 556 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 CD63P08962 238 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 UQCRC2P22695 453 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 SLC6A2P23975 617 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 CD82P27701 267 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 PTGER1P34995 402 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 STT3AP46977 705 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 EFNA3P52797 238 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 LTB4RQ15722 352 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 RUNDC3AQ59EK9 446 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 NANOGP8Q6NSW7 305 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 NANOGQ9H9S0 305 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 SPAG4Q9NPE6 437 aa26.94■■□□□ 1.9
BRF1-213ENST00000548421 CDRT15L2A8MXV6 281 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 IDSB3KWA1 339 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 STMND1H3BQB6 276 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 CYC1P08574 325 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 NT5EP21589 574 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 NSDHLQ15738 373 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 TMEM107Q6UX40 140 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 TMEM64Q6YI46 380 aa26.93■■□□□ 1.9
BRF1-213ENST00000548421 NLGN4XQ8N0W4 816 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms