RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LYARQ9NX58 379 aaKnown RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ERVK-19Q9WJR5 959 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 PKDREJQ9NTG1 2253 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 NKX2-6A6NCS4 301 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 ACOT7O00154 380 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 PPP6CO00743 305 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 OR10H2O60403 315 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 TOXO94900 526 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 AIFM1O95831 613 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SBK3P0C264 359 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 NR2F6P10588 404 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 BUD31P41223 144 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 NUP107P57740 925 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 PHEXP78562 749 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 TFF3Q07654 80 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SLC10A1Q14973 349 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 RTL6Q6ICC9 239 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SLC15A4Q8N697 577 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 OR10G3Q8NGC4 313 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 UHMK1Q8TAS1 419 aaKnown RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 PAQR8Q8TEZ7 354 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 RND1Q92730 232 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SPACA9Q96E40 222 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 TREX2Q9BQ50 279 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 NTMT1Q9BV86 223 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 TEX10Q9NXF1 929 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 PCTPQ9UKL6 214 aa12.3□□□□□ -0.44
CPSF6-204ENST00000547486 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.3□□□□□ -0.44
CPSF6-204ENST00000547486 OR14I1A6ND48 311 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 DYRK3O43781 588 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 LRATO95237 230 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 KLK1P06870 262 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 INHBAP08476 426 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 RBP1P09455 135 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 FBXO45P0C2W1 286 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 CT62P0C5K7 136 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 SLC35E2P0CK97 266 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 ENDOUP21128 410 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 SSTR2P30874 369 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 CHRNB4P30926 498 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 SSTR4P31391 388 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 GALNSP34059 522 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 TRAF3Q13114 568 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 EBPQ15125 230 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 WHAMMP3Q1A5X7 153 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 SGO1Q5FBB7 561 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 PRAMEF20Q5VT98 475 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 FRG2Q64ET8 278 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 ZNF585AQ6P3V2 769 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 TMEM64Q6YI46 380 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 MEX3BQ6ZN04 569 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 RNF111Q6ZNA4 994 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 NUDT13Q86X67 352 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 SLC22A8Q8TCC7 542 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 DCAKDQ8WVC6 231 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 ART5Q96L15 291 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 FRG2BQ96QU4 278 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 GAL3ST4Q96RP7 486 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 PAFAH2Q99487 392 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 SERPINI1Q99574 410 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 WWTR1Q9GZV5 400 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 FARSBQ9NSD9 589 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 XPR1Q9UBH6 696 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 MTRF1LQ9UGC7 380 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 CNOT11Q9UKZ1 510 aaKnown RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 FAM215AQ9Y5M1 114 aa12.29□□□□□ -0.44
CPSF6-204ENST00000547486 CHCHD2Q9Y6H1 151 aaPredicted RBP12.29□□□□□ -0.44
CPSF6-204ENST00000547486 TACC2O95359 2948 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 LRRC3CA6NJW4 275 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 FAM90A27PA6NNH2 459 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 POC1B-GALNT4F8VUJ3 575 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 STX16-NPEPL1H3BU86 382 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 AQP7O14520 342 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 STX16O14662 325 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 SUSD5O60279 629 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 GLI4P10075 376 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 IGFBP2P18065 325 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 TSPAN8P19075 237 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 ACVR2AP27037 513 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 ARL1P40616 181 aaPredicted RBP12.28□□□□□ -0.44
CPSF6-204ENST00000547486 CCNG1P51959 295 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 SLC29A4Q7RTT9 530 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 FBXW8Q8N3Y1 598 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 ZNF441Q8N8Z8 693 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 FAM13CQ8NE31 585 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 OR4F6Q8NGB9 312 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 ASB5Q8WWX0 329 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 C14orf79Q96F83 325 aa12.28□□□□□ -0.44
CPSF6-204ENST00000547486 PELOQ9BRX2 385 aaKnown RBP12.28□□□□□ -0.44
CPSF6-204ENST00000547486 TTYH2Q9BSA4 534 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms