RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SMYD2Q9NRG4 433 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 MS4A12Q9NXJ0 267 aa15.28■□□□□ 0.04
CPSF7-225ENST00000545934 RAI1Q7Z5J4 1906 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 MBD3L4A6NDZ8 208 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 MBD3L3A6NE82 208 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 TUBAL3A6NHL2 446 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 MBD3L5A6NJ08 208 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CD8B2A6NJW9 211 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 E7ESA3 106 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 DYRK3O43781 588 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 LRATO95237 230 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 TGFB1P01137 390 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 IL2RAP01589 272 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CCDC166P0CW27 439 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ALOX15P16050 662 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 GDF1P27539 372 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 SERPINB1P30740 379 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 SSR2P43308 183 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CDK9P50750 372 aaKnown RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 HERVK_113P63132 956 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ERVK-8P63133 956 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 POU4F1Q01851 419 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 IRF8Q02556 426 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ILF2Q12905 390 aaKnown RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 SLAMF1Q13291 335 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 KEAP1Q14145 624 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 FASTKD3Q14CZ7 662 aaKnown RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 C18orf63Q68DL7 685 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 OR4C11Q6IEV9 310 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CHSY3Q70JA7 882 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 LRRC70Q7Z2Q7 622 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 KIF18BQ86Y91 864 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 PM20D2Q8IYS1 436 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 OR7G3Q8NG95 312 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 MBD3L2Q8NHZ7 208 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 UBE2E3Q969T4 207 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ARSGQ96EG1 525 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 HSPBAP1Q96EW2 488 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CMTM7Q96FZ5 175 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 UBXN10Q96LJ8 280 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ZNF597Q96LX8 424 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 SORBS1Q9BX66 1292 aaKnown RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ERVK-6Q9BXR3 956 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CD244Q9BZW8 370 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 CAB39LQ9H9S4 337 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 NSMCE4AQ9NXX6 385 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 ERVK-19Q9WJR5 959 aa15.27■□□□□ 0.04
CPSF7-225ENST00000545934 MTO1Q9Y2Z2 717 aaKnown RBP15.27■□□□□ 0.04
CPSF7-225ENST00000545934 A0A1W2PPR1 153 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 OR6C76A6NM76 312 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 SAP18O00422 153 aaKnown RBP15.26■□□□□ 0.03
CPSF7-225ENST00000545934 IL18BPO95998 194 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 CD53P19397 219 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 GALNSP34059 522 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 HNRNPH2P55795 449 aaKnown RBP15.26■□□□□ 0.03
CPSF7-225ENST00000545934 ATP6V0D1P61421 351 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 TMEM198Q66K66 360 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 MED27Q6P2C8 311 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 RNF111Q6ZNA4 994 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 SLC29A4Q7RTT9 530 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 GPR180Q86V85 440 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 SLC35F6Q8N357 371 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 ZCCHC7Q8N3Z6 543 aaKnown RBP15.26■□□□□ 0.03
CPSF7-225ENST00000545934 FBXO36Q8NEA4 188 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 LINC01560Q8TB33 94 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 DOK4Q8TEW6 326 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 JSRP1Q96MG2 331 aaPredicted RBP15.26■□□□□ 0.03
CPSF7-225ENST00000545934 GAL3ST4Q96RP7 486 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 KRT12Q99456 494 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 PELOQ9BRX2 385 aaKnown RBP15.26■□□□□ 0.03
CPSF7-225ENST00000545934 ZNF717Q9BY31 904 aaPredicted RBP15.26■□□□□ 0.03
CPSF7-225ENST00000545934 ANGPTL4Q9BY76 406 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 EPB41L4BQ9H329 900 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 PHF11Q9UIL8 331 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 SNX12Q9UMY4 172 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 MED12Q93074 2177 aa15.26■□□□□ 0.03
CPSF7-225ENST00000545934 IQANK1A0A1B0GTG1 560 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 CLCA1A8K7I4 914 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 PLPP1O14494 284 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 CCNT2O60583 730 aaKnown RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 SH3BGRLO75368 114 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 PRKRAO75569 313 aaKnown RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 SEC31AO94979 1220 aaKnown RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 GPR75O95800 540 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 HRGP04196 525 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 INHBBP09529 407 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 CTSSP25774 331 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 ARFIP1P53367 373 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 SLC12A2P55011 1212 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 ARL4CP56559 192 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 DCAF7P61962 342 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 RPS6KA2Q15349 733 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 SF3B4Q15427 424 aaKnown RBP eCLIP15.25■□□□□ 0.031e-9■■■■■ 29.1
CPSF7-225ENST00000545934 ZKSCAN8Q15776 578 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 DCST1Q5T197 706 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 MRM1Q6IN84 353 aaKnown RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 SYDE1Q6ZW31 735 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 Q71RC1 249 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-225ENST00000545934 RNF175Q8N4F7 328 aa15.25■□□□□ 0.03
CPSF7-225ENST00000545934 SPPL2AQ8TCT8 520 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms