RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 FAM92BQ6ZTR7 304 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 COMMD6Q7Z4G1 85 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 TMPRSS11BQ86T26 416 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 SLC30A8Q8IWU4 369 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 RAVER1Q8IY67 606 aaKnown RBP10.91□□□□□ -0.66
DDB1-224ENST00000545894 OR9Q1Q8NGQ5 310 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 FOXJ1Q92949 421 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 SCAMP4Q969E2 229 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 TMEM159Q96B96 161 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 PKP4Q99569 1192 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 MND1Q9BWT6 205 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 UCK2Q9BZX2 261 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 SLC22A4Q9H015 551 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 FAM83DQ9H4H8 585 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 NDUFB11Q9NX14 153 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 SSR3Q9UNL2 185 aa10.91□□□□□ -0.66
DDB1-224ENST00000545894 TRBV4-1A0A0J9YWV2 114 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 NEDD8-MDP1E9PL57 170 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 FAM227AF5H4B4 570 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 RECKO95980 971 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 GBAP04062 536 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 ADH5P11766 374 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 ITGB7P26010 798 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 SOAT1P35610 550 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 DGKEP52429 567 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 RACK1P63244 317 aaKnown RBP10.9□□□□□ -0.66
DDB1-224ENST00000545894 ILKQ13418 452 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 TDGQ13569 410 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 E2F2Q14209 437 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 LARS2Q15031 903 aaKnown RBP10.9□□□□□ -0.66
DDB1-224ENST00000545894 IER5LQ5T953 404 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 ARMCX6Q7L4S7 300 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 NEIL2Q969S2 332 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 TRMT61AQ96FX7 289 aaKnown RBP10.9□□□□□ -0.66
DDB1-224ENST00000545894 NECAB3Q96P71 396 aaPredicted RBP10.9□□□□□ -0.66
DDB1-224ENST00000545894 TMEM246Q9BRR3 403 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
DDB1-224ENST00000545894 TIGARQ9NQ88 270 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 DNAJC27Q9NZQ0 273 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 MARK1Q9P0L2 795 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 GULP1Q9UBP9 304 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 REV1Q9UBZ9 1251 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 NDOR1Q9UHB4 597 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 TMCC3Q9ULS5 477 aa10.9□□□□□ -0.66
DDB1-224ENST00000545894 RPL36Q9Y3U8 105 aaKnown RBP10.9□□□□□ -0.66
DDB1-224ENST00000545894 LINC00854A0A1B0GVQ3 168 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 FFAR1O14842 300 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 POP4O95707 220 aaKnown RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 TYRP14679 529 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 PREPP48147 710 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 HYAL2Q12891 473 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 MLLT11Q13015 90 aaPredicted RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 ASAH1Q13510 395 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 TAB1Q15750 504 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 DUSP7Q16829 419 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 RNLSQ5VYX0 342 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 DPY19L3Q6ZPD9 716 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 FAM181AQ8N9Y4 354 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 PROKR2Q8NFJ6 384 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 C16orf78Q8WTQ4 265 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 CHFRQ96EP1 664 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 POLR2J2Q9GZM3 115 aaKnown RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 MYNNQ9NPC7 610 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 SNX7Q9UNH6 387 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 HS3ST2Q9Y278 367 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 KLHL20Q9Y2M5 609 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 A0A1W2PRB8 838 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 FOXE1O00358 373 aaPredicted RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 QSOX1O00391 747 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 TFECO14948 347 aaPredicted RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 TSPAN6O43657 245 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 TPST2O60704 377 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 ADH1CP00326 375 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 HBQ1P09105 142 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 GJA4P35212 333 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 FEN1P39748 380 aaKnown RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 SLC6A11P48066 632 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 SOX9P48436 509 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 LIM2P55344 173 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 DSTNP60981 165 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 POLR2LP62875 67 aaKnown RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 ZNF91Q05481 1191 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 SLAMF1Q13291 335 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 PUM1Q14671 1186 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDB1-224ENST00000545894 ITPRIPL2Q3MIP1 535 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 GLYR1Q49A26 553 aaPredicted RBP10.89□□□□□ -0.67
DDB1-224ENST00000545894 C12orf73Q69YU5 71 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 FAM71E1Q6IPT2 247 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 REEP3Q6NUK4 255 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 FAM131AQ6UXB0 335 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 CASP12Q6UXS9 341 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 HSD11B1LQ7Z5J1 315 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 C12orf40Q86WS4 652 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 WDR48Q8TAF3 677 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 TTYH2Q9BSA4 534 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 MMP28Q9H239 520 aa10.89□□□□□ -0.67
DDB1-224ENST00000545894 TRPV5Q9NQA5 729 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms