RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 DEFA1P59665 94 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 DEFA3P59666 94 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 IFITM3Q01628 133 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 SLC9A5Q14940 896 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 CEBPEQ15744 281 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 MAPK11Q15759 364 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 ZIC1Q15915 447 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 WSCD2Q2TBF2 565 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 FAM78AQ5JUQ0 283 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 AGBL4Q5VU57 503 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 TMEM236Q5W0B7 351 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 SAMD14Q8IZD0 417 aaPredicted RBP11.8□□□□□ -0.52
PAAF1-215ENST00000544909 OR9Q1Q8NGQ5 310 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 CREB3L4Q8TEY5 395 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 GTPBP3Q969Y2 492 aaKnown RBP11.8□□□□□ -0.52
PAAF1-215ENST00000544909 FAM131CQ96AQ9 280 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 TMEM80Q96HE8 168 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 PRRC1Q96M27 445 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 AMDHD1Q96NU7 426 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 POLR2J3Q9H1A7 115 aaKnown RBP11.8□□□□□ -0.52
PAAF1-215ENST00000544909 FBRSQ9HAH7 460 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 ISYNA1Q9NPH2 558 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 MRPS18AQ9NVS2 196 aaKnown RBP11.8□□□□□ -0.52
PAAF1-215ENST00000544909 LIPT1Q9Y234 373 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 LSM2Q9Y333 95 aaKnown RBP11.8□□□□□ -0.52
PAAF1-215ENST00000544909 HEBP2Q9Y5Z4 205 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 MAN2B1O00754 1011 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 DSCR3O14972 297 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TMPRSS11DO60235 418 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 OR10H3O60404 316 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 CD72P21854 359 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 PSMA1P25786 263 aaKnown RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 DRD3P35462 400 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TIE1P35590 1138 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 IL12RB1P42701 662 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 XKP51811 444 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 MLLT11Q13015 90 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 GANABQ14697 944 aaKnown RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SEC23BQ15437 767 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SPANXN2Q5MJ10 180 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 MRM1Q6IN84 353 aaKnown RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 PGBD2Q6P3X8 592 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TNFAIP8L2Q6P589 184 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 ZBTB46Q86UZ6 589 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 LYSMD2Q8IV50 215 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 PLA2G15Q8NCC3 412 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SETD6Q8TBK2 473 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 C1QTNF7Q9BXJ2 289 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 PINK1Q9BXM7 581 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 ALOXE3Q9BYJ1 711 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 CUEDC1Q9NWM3 386 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 CXXC1Q9P0U4 656 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SLC23A2Q9UGH3 650 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TBC1D3BA6NDS4 549 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 ANHXE9PGG2 379 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 BOLA2-SMG1P6H3BVE0 249 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 OR1F1O43749 312 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SH3BP5O60239 455 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 LGI1O95970 557 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 EPHX1P07099 455 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 FHP07954 510 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SSR2P43308 183 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SLC6A11P48066 632 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 NUDT6P53370 316 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TAS2R38P59533 333 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 PRR5P85299 388 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TGM3Q08188 693 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 HSPB3Q12988 150 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 CBX3Q13185 183 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 DUSP6Q16828 381 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 ENTPD8Q5MY95 495 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 PERM1Q5SV97 790 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 IER5LQ5T953 404 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 NDUFAF5Q5TEU4 345 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 C1orf94Q6P1W5 598 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 UBE3DQ7Z6J8 389 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 MRGPREQ86SM8 312 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 CCDC190Q86UF4 302 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 LINC01555Q8NAE3 123 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 ST13P5Q8NFI4 369 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 OR2A1Q8NGT9 310 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 EFHD2Q96C19 240 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 WDFY2Q96P53 400 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 DZANK1Q9NVP4 752 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 NDUFB11Q9NX14 153 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 A4GNTQ9UNA3 340 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 DIMT1Q9UNQ2 313 aaKnown RBP11.79□□□□□ -0.52
PAAF1-215ENST00000544909 SLC17A4Q9Y2C5 497 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 TMEM98Q9Y2Y6 226 aa11.79□□□□□ -0.52
PAAF1-215ENST00000544909 COL4A3Q01955 1670 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 GSAPA4D1B5 854 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 SLC35F4A4IF30 521 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 H7BY64 318 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 HAT1O14929 419 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 SLC28A2O43868 658 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 AGR2O95994 175 aa11.78□□□□□ -0.52
PAAF1-215ENST00000544909 GAAP10253 952 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms