RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 BNC1Q01954 994 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 DAG1Q14118 895 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 MAP7Q14244 749 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 LPAL2Q16609 132 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 OR2T5Q6IEZ7 315 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 KRT80Q6KB66 452 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 CYP4Z1Q86W10 505 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 GKN2Q86XP6 184 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 CAMKK1Q8N5S9 505 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 OR7G2Q8NG99 324 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 OR2T29Q8NH02 315 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 VANGL1Q8TAA9 524 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SGCDQ92629 289 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 ZNF681Q96N22 645 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 LRIT1Q9P2V4 623 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 ENTPD4Q9Y227 616 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SLC28A2O43868 658 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 FGF17O60258 216 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 PRKNO60260 465 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 TPST2O60704 377 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 JRKO75564 520 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 PIAS2O75928 621 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 OR6B1O95007 311 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 KRT75O95678 551 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 TFPTP0C1Z6 253 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SMIM18P0DKX4 95 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 MATN1P21941 496 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 PPIBP23284 216 aaKnown RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 ELK4P28324 431 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SOX18P35713 384 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SELENOWP63302 87 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 FUT5Q11128 374 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 Q6ZPB1 254 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 DGAT2L6Q6ZPD8 337 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 LACC1Q8IV20 430 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 C19orf47Q8N9M1 422 aaKnown RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 OR52E4Q8NGH9 312 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 NT5CQ8TCD5 201 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 MBOAT4Q96T53 435 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 DOHHQ9BU89 302 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 TWSG1Q9GZX9 223 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 Q9H521 79 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 RLIMQ9NVW2 624 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SOHLH2Q9NX45 425 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 PDP1Q9P0J1 537 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 RPS6KA6Q9UK32 745 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 SAMHD1Q9Y3Z3 626 aaKnown RBP12.88□□□□□ -0.35
HCFC2-202ENST00000544223 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 B3GALT2O43825 422 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SEMA7AO75326 666 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 LINGO3P0C6S8 592 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SMIM10L1P0DMW3 83 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 ARAFP10398 606 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 POU2F1P14859 743 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 MAGEA2P43356 314 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 CAPZBP47756 277 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 ALDH3A2P51648 485 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 AFF3P51826 1226 aaKnown RBP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 FOXL2P58012 376 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SIM2Q14190 667 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PRR23CQ6ZRP0 262 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SATL1Q86VE3 508 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 CAMKVQ8NCB2 501 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TBC1D20Q96BZ9 403 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SMIM10Q96HG1 83 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TREX2Q9BQ50 279 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 ADPRHL2Q9NX46 363 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TMEFF2Q9UIK5 374 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TMEM184BQ9Y519 407 aaPredicted RBP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PCDHGA2Q9Y5H1 932 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 MAU2Q9Y6X3 613 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 A6NHS1 94 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PATE3B3GLJ2 98 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 C5orf58C9J3I9 102 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 LMO7DNF2Z398 122 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 FRS3O43559 492 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 NTN1O95631 604 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PTNP21246 168 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PPP2R1BP30154 601 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 DAPP51397 102 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 HNRNPKP61978 463 aaKnown RBP eCLIP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TNFRSF17Q02223 184 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 CFHR1Q03591 330 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 FADDQ13158 208 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 RNF44Q7L0R7 432 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SLC35F3Q8IY50 421 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms