RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 NECTIN4Q96NY8 510 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 CNIH4Q9P003 139 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 PRELID1Q9Y255 219 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 CARD8Q9Y2G2 431 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZSCAN5BA6NJL1 495 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 PCDHGA12O60330 932 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 RPS17P08708 135 aaKnown RBP12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 SMIM18P0DKX4 95 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 ADAM8P78325 824 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 RBBP4Q09028 425 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 HSF5Q4G112 596 aaPredicted RBP12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 CRTC1Q6UUV9 634 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 OR8K5Q8NH50 307 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 TMEM19Q96HH6 336 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 A0A1W2PRQ8 180 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 FAM227AF5H4B4 570 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 VAMP1P23763 118 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 STXBP1P61764 594 aaKnown RBP12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZNF45Q02386 682 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZNF542PQ5EBM4 170 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 DUS1LQ6P1R4 473 aaKnown RBP12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 OLIG3Q7RTU3 272 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 LRRTM4Q86VH4 590 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 OR10H5Q8NGA6 315 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 THEM6Q8WUY1 208 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 CASD1Q96PB1 797 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 PIP5K1AQ99755 562 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 TUBB1Q9H4B7 451 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 GPN1Q9HCN4 374 aaPredicted RBP12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
TUBGCP2-210ENST00000543663 H0YJX3 145 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 DLGAP1O14490 977 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 VIPR2P41587 438 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 GRK6P43250 576 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 MAGEA11P43364 429 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 PUM1Q14671 1186 aaKnown RBP eCLIP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 AMZ1Q400G9 498 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 TMEM107Q6UX40 140 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 SH2D5Q6ZV89 423 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 ELMOD2Q8IZ81 293 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 OR4K5Q8NGD3 323 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 OR5D16Q8NGK9 328 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 BCL7CQ8WUZ0 217 aaPredicted RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 SMPDL3BQ92485 455 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 UBXN10Q96LJ8 280 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 CD180Q99467 661 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 TMEM121BQ9BXQ6 578 aaPredicted RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 C12orf4Q9NQ89 552 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 NUPL2O15504 423 aaKnown RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZNF432O94892 652 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 SRPRAP08240 638 aaKnown RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 C1GALT1C1LP0DN25 315 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 JUPP14923 745 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 RING1Q06587 406 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 ST3GAL3Q11203 375 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 SFRP4Q6FHJ7 346 aaPredicted RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 SLC27A4Q6P1M0 643 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 FIGNL1Q6PIW4 674 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 PJA1Q8NG27 643 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 CCDC120Q96HB5 630 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 MCCC1Q96RQ3 725 aaPredicted RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 C1QTNF1Q9BXJ1 281 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZNF717Q9BY31 904 aaPredicted RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 MARCH5Q9NX47 278 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 HTR3EA5X5Y0 456 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 FAM171A2A8MVW0 826 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 WWP2O00308 870 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 APODP05090 189 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 GCGRP47871 477 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 C7orf61Q8IZ16 206 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 MINDY2Q8NBR6 621 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 CNDP2Q96KP4 475 aaKnown RBP12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZNF583Q96ND8 569 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 MAU2Q9Y6X3 613 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 COLEC10Q9Y6Z7 277 aa12.35□□□□□ -0.43
TUBGCP2-210ENST00000543663 LOC105369274A0A096LPK9 316 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 CLCA1A8K7I4 914 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 FAM47E-STBD1D6RA91 191 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 EIF1AYO14602 144 aaKnown RBP12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 PLD2O14939 933 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 SOD2P04179 222 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 HMGN1P05114 100 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 FAUP35544 74 aaKnown RBP12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 TGFBR1P36897 503 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 HTR2BP41595 481 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 CDKN2CP42773 168 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 MAP2K3P46734 347 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 PEG10Q86TG7 708 aaKnown RBP12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 IQCF2Q8IXL9 164 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 OR4N4Q8N0Y3 316 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 TBC1D15Q8TC07 691 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 NEK7Q8TDX7 302 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 CLEC4EQ9ULY5 219 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 GRIP1Q9Y3R0 1128 aa12.34□□□□□ -0.43
TUBGCP2-210ENST00000543663 A0A1B0GTL3 188 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms