RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
COPS7A-216ENST00000543170 RYDENQ9NUL5 291 aaKnown RBP17.12■□□□□ 0.33
COPS7A-216ENST00000543170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.12■□□□□ 0.33
COPS7A-216ENST00000543170 THAP1Q9NVV9 213 aa17.12■□□□□ 0.33
COPS7A-216ENST00000543170 STMN3Q9NZ72 180 aa17.12■□□□□ 0.33
COPS7A-216ENST00000543170 HEY2Q9UBP5 337 aa17.12■□□□□ 0.33
COPS7A-216ENST00000543170 UTS2RQ9UKP6 389 aa17.12■□□□□ 0.33
COPS7A-216ENST00000543170 ZNF462Q96JM2 2506 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 OR5H15A6NDH6 313 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 FCHO1O14526 889 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 KLF11O14901 512 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 SNNO75324 88 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 SKAP2O75563 359 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 ZFAND5O76080 213 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 WDPCPO95876 746 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 CSNK2A2P19784 350 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 ALDH9A1P49189 494 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 XKP51811 444 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 MLF1P58340 268 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 RPL38P63173 70 aaKnown RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 TLR1Q15399 786 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 CEBPEQ15744 281 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 FAM71E1Q6IPT2 247 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 HSDL2Q6YN16 418 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 DGAT2L6Q6ZPD8 337 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 GALNT12Q8IXK2 581 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 BEST3Q8N1M1 668 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 Q8NA96 180 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 RIT1Q92963 219 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 PPWD1Q96BP3 646 aaKnown RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 SENP5Q96HI0 755 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 ZNF681Q96N22 645 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 ZNF395Q9H8N7 513 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-216ENST00000543170 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 CSAG2Q9Y5P2 127 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 ZNF780BQ9Y6R6 833 aa17.11■□□□□ 0.33
COPS7A-216ENST00000543170 CROCCQ5TZA2 2017 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 A0A1W2PS29 197 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 GABRR3A8MPY1 467 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 ERAL1O75616 437 aaKnown RBP17.1■□□□□ 0.33
COPS7A-216ENST00000543170 SDC1P18827 310 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 MAPK1P28482 360 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 TNFSF10P50591 281 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 ZNF169Q14929 603 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-216ENST00000543170 SMU1Q2TAY7 513 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 ATP6AP1LQ52LC2 224 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 RFTN2Q52LD8 501 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-216ENST00000543170 C6orf163Q5TEZ5 329 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 FCRLBQ6BAA4 426 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 LRRC34Q8IZ02 419 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 LRRC25Q8N386 305 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-216ENST00000543170 NUBPLQ8TB37 319 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 CNRIP1Q96F85 164 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-216ENST00000543170 MFRPQ9BY79 579 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 EPN3Q9H201 632 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 CDCP1Q9H5V8 836 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 TRIM45Q9H8W5 580 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-216ENST00000543170 TAS2R7Q9NYW3 318 aa17.1■□□□□ 0.33
COPS7A-216ENST00000543170 TRAV17A0A0B4J275 112 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 OR6C76A6NM76 312 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 MAN1A2O60476 641 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 TRHRP34981 398 aaPredicted RBP17.09■□□□□ 0.33
COPS7A-216ENST00000543170 ERVK-8P63133 956 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 RNF4P78317 190 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 FUT7Q11130 342 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 INAQ16352 499 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 GALNTL6Q49A17 601 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 RPUSD3Q6P087 351 aaKnown RBP17.09■□□□□ 0.33
COPS7A-216ENST00000543170 PRICKLE2Q7Z3G6 844 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 ZNF321PQ8N8H1 164 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 OR5L2Q8NGL0 311 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 C3orf30Q96M34 536 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 CNPPD1Q9BV87 410 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 MANSC1Q9H8J5 431 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 SLAMF7Q9NQ25 335 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 MIEF1Q9NQG6 463 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 SLC35C2Q9NQQ7 365 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 GIMAP4Q9NUV9 329 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 ERVK-19Q9WJR5 959 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 ENTPD4Q9Y227 616 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 PCDHGA10Q9Y5H3 936 aa17.09■□□□□ 0.33
COPS7A-216ENST00000543170 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 TMEM200CA6NKL6 621 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 SLC28A2O43868 658 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 PRKNO60260 465 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-216ENST00000543170 TBX19O60806 448 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 NT5EP21589 574 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 TACR1P25103 407 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 ASMTP46597 345 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 HK2P52789 917 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 SLC37A1P57057 533 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 OCRLQ01968 901 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 C2orf80Q0P641 193 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 MAD2L1Q13257 205 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-216ENST00000543170 TUBA3CQ13748 450 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 ZNF267Q14586 743 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-216ENST00000543170 PDCD2Q16342 344 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-216ENST00000543170 PRICKLE4Q2TBC4 344 aa17.08■□□□□ 0.32
COPS7A-216ENST00000543170 PLEKHN1Q494U1 663 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms