RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 GLIPR2Q9H4G4 154 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 ARMCX1Q9P291 453 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 TPRP12270 2363 aaKnown RBP19.44■□□□□ 0.7
OTUB1-211ENST00000543004 PDPK1O15530 556 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 OR10H2O60403 315 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CYC1P08574 325 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CT62P0C5K7 136 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 TNNI3P19429 210 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 RPL3P39023 403 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 MRPL19P49406 292 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ATP4BP51164 291 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 NCBP2P52298 156 aaKnown RBP eCLIP19.43■□□□□ 0.72e-8■□□□□ 9.5
OTUB1-211ENST00000543004 PLIN5Q00G26 463 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 AGKQ53H12 422 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 PAPD4Q6PIY7 484 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 LRRC69Q6ZNQ3 347 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CAMKMTQ7Z624 323 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 RAB43Q86YS6 212 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 LRRC25Q8N386 305 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CPSF7Q8N684 471 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 KDF1Q8NAX2 398 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 SIMC1Q8NDZ2 872 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 OR9A2Q8NGT5 310 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ZNF764Q96H86 408 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ANKRA2Q9H9E1 313 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 C19orf25Q9UFG5 118 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 FBXL4Q9UKA2 621 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 MAP1BP46821 2468 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ZNF891A8MT65 544 aaPredicted RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 C17orf105B2RV13 164 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 FCHO1O14526 889 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CELA2AP08217 269 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 NT5EP21589 574 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 POLR2JP52435 117 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CLNS1AP54105 237 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 MRPS35P82673 323 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CDC20Q12834 499 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CPZQ66K79 652 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 FAM111BQ6SJ93 734 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 GK5Q6ZS86 529 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ANKRD46Q86W74 232 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 CLECL1Q8IZS7 167 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ZNF321PQ8N8H1 164 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 BCAS4Q8TDM0 211 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 VPS33AQ96AX1 596 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 AMDHD1Q96NU7 426 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 PRPF18Q99633 342 aaKnown RBP19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ZNF700Q9H0M5 742 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ZNF160Q9HCG1 818 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ADAP2Q9NPF8 381 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 GIMAP4Q9NUV9 329 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ERVK-11Q9UQG0 969 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 ARL2BPQ9Y2Y0 163 aa19.43■□□□□ 0.7
OTUB1-211ENST00000543004 PTPRQQ9UMZ3 2332 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 A0A087WV48 116 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 SCN2BO60939 215 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 ATP1B1P05026 303 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 FRKP42685 505 aaPredicted RBP19.42■□□□□ 0.7
OTUB1-211ENST00000543004 KIR3DL1P43629 444 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 PGDP52209 483 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 MGAT2Q10469 447 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 HSPB3Q12988 150 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 ELAVL1Q15717 326 aaKnown RBP19.42■□□□□ 0.7
OTUB1-211ENST00000543004 GKAP1Q5VSY0 366 aaPredicted RBP19.42■□□□□ 0.7
OTUB1-211ENST00000543004 OR8J2Q8NGG1 315 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 KAT2AQ92830 837 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 RIT1Q92963 219 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 ZBTB18Q99592 522 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 BHLHE41Q9C0J9 482 aaPredicted RBP19.42■□□□□ 0.7
OTUB1-211ENST00000543004 CXorf21Q9HAI6 301 aa19.42■□□□□ 0.7
OTUB1-211ENST00000543004 DOCK10Q96BY6 2186 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 TMEM8BA6NDV4 472 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 NR5A2O00482 541 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 NDUFAB1O14561 156 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 PGRP06401 933 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 NTSP30990 170 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 S100A3P33764 101 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 MPIP34949 423 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 CBX1P83916 185 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 SRSF11Q05519 484 aaKnown RBP19.41■□□□□ 0.7
OTUB1-211ENST00000543004 Q0VFX4 171 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 CHAF1BQ13112 559 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 KLF10Q13118 480 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 PRICKLE4Q2TBC4 344 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 TIGD2Q4W5G0 525 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 BLOC1S3Q6QNY0 202 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 GLB1L3Q8NCI6 653 aaPredicted RBP19.41■□□□□ 0.7
OTUB1-211ENST00000543004 NFAM1Q8NET5 270 aaPredicted RBP19.41■□□□□ 0.7
OTUB1-211ENST00000543004 IMMP1LQ96LU5 166 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 LPAR4Q99677 370 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 SLC52A3Q9NQ40 469 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 ATAD3AQ9NVI7 634 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 MAT2BQ9NZL9 334 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 CLCA3PQ9Y6N3 262 aa19.41■□□□□ 0.7
OTUB1-211ENST00000543004 NSG1A0A0A6YYJ2 146 aa19.4■□□□□ 0.7
OTUB1-211ENST00000543004 A0A1W2PQ72 361 aa19.4■□□□□ 0.7
OTUB1-211ENST00000543004 A0A1W2PRB8 838 aa19.4■□□□□ 0.7
OTUB1-211ENST00000543004 FAM234BA2RU67 622 aa19.4■□□□□ 0.7
OTUB1-211ENST00000543004 SAGE2PA6NJ88 616 aa19.4■□□□□ 0.7
OTUB1-211ENST00000543004 NME6O75414 186 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms