RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 GTF2E2P29084 291 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PBLDP30039 288 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CSTF2P33240 577 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 HOXD12P35452 270 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 BSGP35613 385 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NNMTP40261 264 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OPRD1P41143 372 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 WDR5P61964 334 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MEF2AQ02078 507 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DPTQ07507 201 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 STARD3Q14849 445 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NCF4Q15080 339 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SEC23BQ15437 767 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KCNJ8Q15842 424 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TSTQ16762 297 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CYP27C1Q4G0S4 372 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC25A30Q5SVS4 291 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PRAMEF14Q5SWL7 426 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ATAD3BQ5T9A4 648 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PRAMEF13Q5VWM6 474 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TMIGD1Q6UXZ0 262 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PTCHD4Q6ZW05 846 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 RTL10Q7L3V2 364 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GDPD3Q7L5L3 318 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 C11orf96Q7Z7L8 435 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NLGN4XQ8N0W4 816 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MMP21Q8N119 569 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 HORMAD2Q8N7B1 307 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LMNTD1Q8N9Z9 388 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 POC5Q8NA72 575 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF740Q8NDX6 193 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FLCNQ8NFG4 579 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OR2L2Q8NH16 312 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FGF11Q92914 225 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TM4SF18Q96CE8 201 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF514Q96K75 400 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC6A18Q96N87 628 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 YME1L1Q96TA2 773 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CCDC32Q9BV29 185 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NLNQ9BYT8 704 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 HOXD1Q9GZZ0 328 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KLHL25Q9H0H3 589 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OR2AG1Q9H205 316 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OR52A5Q9H2C5 316 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NT5DC2Q9H857 520 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PELI2Q9HAT8 420 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 BRD7Q9NPI1 651 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SIRT3Q9NTG7 399 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FBXL12Q9NXK8 326 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NPAP1Q9NZP6 1156 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GPR34Q9UPC5 381 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ITM2BQ9Y287 266 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 IRAK3Q9Y616 596 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LRRK1Q38SD2 2015 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 NOTCH4Q99466 2003 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MUC22E2RYF6 1773 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM227AF5H4B4 570 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 K7ESM1 405 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TLR4O00206 839 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 FAAHO00519 579 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PLPP1O14494 284 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 DYRK3O43781 588 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 VEGFDO43915 354 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MMP20O60882 483 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 POP7O75817 140 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PF4P02776 101 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 DNTTP04053 509 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CELA3AP09093 270 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 POU2F1P14859 743 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PTPN2P17706 415 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CD72P21854 359 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 KELP23276 732 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ELAVL4P26378 380 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SOAT1P35610 550 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SOX6P35712 828 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CASP3P42574 277 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CRYBB2P43320 205 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 GSTM5P46439 218 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 KCNJ5P48544 419 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 DGKGP49619 791 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SEPHS1P49903 392 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 METAP1P53582 386 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TPTEP56180 551 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 EFNB1P98172 346 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ALDH6A1Q02252 535 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 RPA4Q13156 261 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 GANABQ14697 944 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ARHGAP19Q14CB8 494 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MLC1Q15049 377 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MED22Q15528 200 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM52BQ4KMG9 183 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ARHGAP15Q53QZ3 475 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 DEPDC1Q5TB30 811 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MFSD4BQ5TF39 518 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 KHDRBS2Q5VWX1 349 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PGBD2Q6P3X8 592 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CCBE1Q6UXH8 406 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CD300LDQ6UXZ3 194 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CEACAM20Q6UY09 585 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms