RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 STX16O14662 325 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MITFO75030 526 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 FAM20BO75063 409 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 CCNB2O95067 398 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 CNOT4O95628 575 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 RAB3DO95716 219 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 OPN1MWP04001 364 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 FGF4P08620 206 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 STSP08842 583 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 OPN1MW2P0DN77 364 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 OPN1MW3P0DN78 364 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 IL7P13232 177 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 BMI1P35226 326 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 TIE1P35590 1138 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 DDOSTP39656 456 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 VIPR2P41587 438 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 CCR9P51686 369 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 PSMD4P55036 377 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 DIO3P55073 304 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 IL2P60568 153 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 LAPTM4AQ15012 233 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 TIGD6Q17RP2 521 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 GPR33Q49SQ1 333 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 RPS26P11Q5JNZ5 115 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 FAM78AQ5JUQ0 283 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 SBSNQ6UWP8 590 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 GDPD4Q6W3E5 623 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 USP45Q70EL2 814 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 NPAS3Q8IXF0 933 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 RBFAQ8N0V3 343 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 NXPE1Q8N323 547 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ARL14Q8N4G2 192 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 AMER2Q8N7J2 671 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 NANPQ8TBE9 248 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 BPIFB1Q8TDL5 484 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 KCNS3Q9BQ31 491 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ACTR6Q9GZN1 396 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ZFP57Q9NU63 452 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 B4GALT6Q9UBX8 382 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ZFR2Q9UPR6 939 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 TPRKBQ9Y3C4 175 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 REV3LO60673 3130 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MEIOCA2RUB1 952 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 METTL15A6NJ78 407 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 SUPT3HB4E1H0 165 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 CTDSP2O14595 271 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 PIP5K1BO14986 540 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 RGS5O15539 181 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 AKR7A2O43488 359 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 BNIP3LO60238 219 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 GPX5O75715 221 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MBP02144 154 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ADH5P11766 374 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ZNF7P17097 686 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MSH3P20585 1137 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 FCARP24071 287 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 CD6P30203 668 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 PIK3CBP42338 1070 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 NRIP1P48552 1158 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MAPK12P53778 367 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 FOXA1P55317 472 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MTPNP58546 118 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ZNF45Q02386 682 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 STARD3Q14849 445 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ODF1Q14990 250 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 LRRC73Q5JTD7 316 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 GPRC6AQ5T6X5 926 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 LYPLAL1Q5VWZ2 237 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 BHLHB9Q6PI77 547 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 AHSA2Q719I0 299 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 DPPA2Q7Z7J5 298 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 FAM86B1Q8N7N1 296 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 PYCR2Q96C36 320 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 PPM1MQ96MI6 270 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 KCNA7Q96RP8 456 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 QRSL1Q9H0R6 528 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 MTG2Q9H4K7 406 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 CERS4Q9HA82 394 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 SARS2Q9NP81 518 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 LATS2Q9NRM7 1088 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ACOXLQ9NUZ1 547 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 ZNF225Q9UK10 706 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 PCTPQ9UKL6 214 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 UTS2RQ9UKP6 389 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 SLC27A6Q9Y2P4 619 aa7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 SAMHD1Q9Y3Z3 626 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-221ENST00000542407 EFCAB7A8K855 629 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 E5RI56 91 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 GSTA4O15217 222 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 SGCEO43556 437 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 RGS10O43665 173 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 CRCPO75575 148 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 LEFTY1O75610 366 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 APOL3O95236 402 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 RAP2AP10114 183 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 GADD45AP24522 165 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 SPINT3P49223 89 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 AGTR2P50052 363 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 RAB13P51153 203 aa7.61□□□□□ -1.19
PDLIM5-221ENST00000542407 MADCAM1Q13477 382 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms