RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 KRT75O95678 551 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 MOCS2O96007 188 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 ALPPP05187 535 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 EDN1P05305 212 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SBK2P0C263 348 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PATE4P0C8F1 98 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 POLR2MP0CAP2 368 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ALPPL2P10696 532 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 KRT3P12035 628 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 EFNA1P20827 205 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 ATP6V1C1P21283 382 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PKLRP30613 574 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CHRNA7P36544 502 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SLC26A3P40879 764 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SERPINH1P50454 418 aaKnown RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 CRIP2P52943 208 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 ATP12AP54707 1039 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CLDN15P56746 228 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 STX17P56962 302 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 TSPAN5P62079 268 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 OTUD4Q01804 1114 aaKnown RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 RELAQ04206 551 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ENPEPQ07075 957 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 COTL1Q14019 142 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 VEZF1Q14119 521 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 MAPK11Q15759 364 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 MRGPRG-AS1Q2M3A8 158 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 LRIT3Q3SXY7 679 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 GTDC1Q4AE62 458 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CCDC58Q4VC31 144 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 TTMPQ5BVD1 217 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 METTL21CQ5VZV1 264 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 OR52E8Q6IFG1 317 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PODNL1Q6PEZ8 512 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ZYG11AQ6WRX3 759 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 C15orf52Q6ZUT6 534 aaKnown RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 STOX1Q6ZVD7 989 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 TOM1L2Q6ZVM7 507 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 RFPL4BQ6ZWI9 263 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ADAMTSL2Q86TH1 951 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ZNF410Q86VK4 478 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 WDR49Q8IV35 697 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CDK20Q8IZL9 346 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ATP6V0D2Q8N8Y2 350 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 THAP8Q8NA92 274 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 MLKLQ8NB16 471 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ZNF248Q8NDW4 579 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 DENND6BQ8NEG7 585 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ZNF680Q8NEM1 530 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 IPMKQ8NFU5 416 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 OR13J1Q8NGT2 312 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 LILRB4Q8NHJ6 448 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FANK1Q8TC84 345 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FNDC8Q8TC99 324 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 URGCPQ8TCY9 931 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SLC2A14Q8TDB8 520 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 GANCQ8TET4 914 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 NELFBQ8WX92 580 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 AP2M1Q96CW1 435 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 LGALS12Q96DT0 336 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SENP5Q96HI0 755 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 VPS39Q96JC1 886 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ZNF560Q96MR9 790 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PANX3Q96QZ0 392 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CTRCQ99895 268 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 TBCDQ9BTW9 1192 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CRNKL1Q9BZJ0 848 aaKnown RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 S1PR5Q9H228 398 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ARRDC1-AS1Q9H2J1 176 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 DPH5Q9H2P9 285 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 OR51B5Q9H339 312 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 MRM3Q9HC36 420 aaKnown RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 A4GALTQ9NPC4 353 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SIX2Q9NPC8 291 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 GIN1Q9NXP7 522 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 SPHK1Q9NYA1 384 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 NINJ2Q9NZG7 142 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ACTR3BQ9P1U1 418 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FETUBQ9UGM5 382 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 PTBP2Q9UKA9 531 aaKnown RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.91□□□□□ -1.94
USP28-210ENST00000542033 RPH3AQ9Y2J0 694 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 IFT52Q9Y366 437 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 L3MBTL1Q9Y468 752 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 CACNG2Q9Y698 323 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 TEX264Q9Y6I9 313 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FAM135AQ9P2D6 1515 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 ZNF608Q9ULD9 1512 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 CASZ1Q86V15 1759 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 BLMP54132 1417 aaPredicted RBP2.91□□□□□ -1.94
USP28-210ENST00000542033 SPATA31E1Q6ZUB1 1445 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 KIF21AQ7Z4S6 1674 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 FRMPD4Q14CM0 1322 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 TTC21AQ8NDW8 1320 aa2.91□□□□□ -1.94
USP28-210ENST00000542033 RAPGEF2Q9Y4G8 1499 aa2.9□□□□□ -1.94
USP28-210ENST00000542033 CPDO75976 1380 aa2.9□□□□□ -1.94
USP28-210ENST00000542033 NSD2O96028 1365 aa2.9□□□□□ -1.94
USP28-210ENST00000542033 CLASP1Q7Z460 1538 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 IGHV4-61A0A0C4DH41 118 aa2.9□□□□□ -1.95
USP28-210ENST00000542033 LOC101059948A0A1B0GTJ6 334 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms