RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TDRKHQ9Y2W6 561 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 MAD1L1Q9Y6D9 718 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 PRSS21Q9Y6M0 314 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 RPS6KL1Q9Y6S9 549 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 COL27A1Q8IZC6 1860 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SPEGQ15772 3267 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TCRBV7S3A2A0A539 114 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 E5RI56 91 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 GOLGA8MH3BSY2 632 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 K7ENP7 123 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 DNALI1O14645 258 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TSPAN4O14817 238 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 RAD1O60671 282 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 AVILO75366 819 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 GPC4O75487 556 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SLCO2B1O94956 709 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 FSHBP01225 129 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 KLK3P07288 261 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SFTPCP11686 197 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 FGF5P12034 268 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PKMP14618 531 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ITGB6P18564 788 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ACADLP28330 430 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PDHA2P29803 388 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PRDX3P30048 256 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 FMO4P31512 558 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 CCR7P32248 378 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF84P51523 738 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 CSE1LP55060 971 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ELLP55199 621 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ADARP55265 1226 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 EIF3BP55884 814 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 RPP30P78346 268 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 DR1Q01658 176 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 MC1RQ01726 317 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ABRQ12979 859 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PRKG2Q13237 762 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PTK6Q13882 451 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SLMAPQ14BN4 828 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 MORF4L2Q15014 288 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 KIF26BQ2KJY2 2108 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TTLL9Q3SXZ7 439 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ANKRD20A4Q4UJ75 823 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TAF1BQ53T94 588 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SPANXN3Q5MJ09 141 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PLEKHS1Q5SXH7 462 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PRAMEF17Q5VTA0 474 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 UGT3A1Q6NUS8 523 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 DUS1LQ6P1R4 473 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 INO80CQ6PI98 192 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 CES3Q6UWW8 571 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 UNC5DQ6UXZ4 953 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SYT10Q6XYQ8 523 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 LDB1Q86U70 411 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM135Q86UB9 458 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM200AQ86VY9 491 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 KLHL7Q8IXQ5 586 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SLC22A15Q8IZD6 547 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PDIK1LQ8N165 341 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 BMPERQ8N8U9 685 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 FAM47BQ8NA70 645 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 OR52E1Q8NGJ3 308 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 OR5K2Q8NHB8 316 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 CFAP61Q8NHU2 1237 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 NAT14Q8WUY8 206 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SNRNP27Q8WVK2 155 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SKA2Q8WVK7 121 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 N4BP2L2Q92802 583 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 RAD51AP1Q96B01 352 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SLC22A18Q96BI1 424 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 REPS1Q96D71 796 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 STAMBPL1Q96FJ0 436 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 WBP1Q96G27 269 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SLC41A2Q96JW4 573 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SERPINB12Q96P63 405 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 MAP3K3Q99759 626 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 CTRCQ99895 268 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 RAB11FIP5Q9BXF6 653 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 ULBP3Q9BZM4 244 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SLC7A5P2Q9GIP4 190 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PAIP1Q9H074 479 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 DDX47Q9H0S4 455 aaKnown RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 C20orf96Q9NUD7 363 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 SOHLH2Q9NX45 425 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 OR6C2Q9NZP2 312 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 LNPEPQ9UIQ6 1025 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 PADI1Q9ULC6 663 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM184BQ9Y519 407 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-220ENST00000541963 FAM169AQ9Y6X4 670 aa5.13□□□□□ -1.59
CPSF7-220ENST00000541963 IGHV5-51A0A0C4DH38 117 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 SLC9B1P1A6NJY1 282 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 SH2D7A6NKC9 451 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-220ENST00000541963 USP27XA6NNY8 438 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 IQCF5A8MTL0 148 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 GOLGA8KD6RF30 607 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 MCIDASD6RGH6 385 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 GOLGA8TH3BQL2 631 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 CYR61O00622 381 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 SPAG6O75602 509 aa5.12□□□□□ -1.59
CPSF7-220ENST00000541963 STK17BO94768 372 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms