RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TEX12Q9BXU0 123 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 MKRN2Q9H000 416 aaKnown RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 RNF121Q9H920 327 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 CARS2Q9HA77 564 aaKnown RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 RASSF1Q9NS23 344 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 B3GNT2Q9NY97 397 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 IL17CQ9P0M4 197 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 NUP50Q9UKX7 468 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 PNMA8BQ9ULN7 279 aaPredicted RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 TMCC3Q9ULS5 477 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 USP22Q9UPT9 525 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 RBMX2Q9Y388 322 aaKnown RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 RAI2Q9Y5P3 530 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 SLCO1B1Q9Y6L6 691 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 MAU2Q9Y6X3 613 aa9.91□□□□□ -0.82
CHFR-219ENST00000541341 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
CHFR-219ENST00000541341 RGS5O15539 181 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 TPD52L2O43399 206 aaKnown RBP9.9□□□□□ -0.82
CHFR-219ENST00000541341 MITFO75030 526 aaPredicted RBP9.9□□□□□ -0.82
CHFR-219ENST00000541341 NOS1APO75052 506 aaPredicted RBP9.9□□□□□ -0.82
CHFR-219ENST00000541341 ZNF217O75362 1048 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ITGA10O75578 1167 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ADAP00813 363 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 RHOCP08134 193 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 OR56A5P0C7T3 313 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 CYP4B1P13584 511 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 HLA-EP13747 358 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 COX7A2P14406 83 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 RHCEP18577 417 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 GALP22466 123 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 MYL9P24844 172 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ALDH4A1P30038 563 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SOX11P35716 441 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 NR4A2P43354 598 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 INPP1P49441 399 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 HTR6P50406 440 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
CHFR-219ENST00000541341 CD300CQ08708 224 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 COX10Q12887 443 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 MAB21L1Q13394 359 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 IKZF1Q13422 519 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 CDH18Q13634 790 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 TMEM201Q5SNT2 666 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SLC25A30Q5SVS4 291 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SLC35F1Q5T1Q4 408 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SIGIRRQ6IA17 410 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 NOXRED1Q6NXP6 359 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ZNF621Q6ZSS3 439 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 PTCHD4Q6ZW05 846 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 CLIP4Q8N3C7 705 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 PLA2G15Q8NCC3 412 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 OR4A15Q8NGL6 344 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 WFIKKN2Q8TEU8 576 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ACOT12Q8WYK0 555 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SGCDQ92629 289 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 TMEM80Q96HE8 168 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ST6GAL2Q96JF0 529 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 C7orf34Q96L11 122 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 OR2A14Q96R47 310 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 DHRS9Q9BPW9 319 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ASPNQ9BXN1 380 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 CIPCQ9C0C6 399 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 BHLHE41Q9C0J9 482 aaPredicted RBP9.9□□□□□ -0.82
CHFR-219ENST00000541341 FAM83DQ9H4H8 585 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 TMEM38AQ9H6F2 299 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ANKRA2Q9H9E1 313 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 FOLH1BQ9HBA9 442 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SARS2Q9NP81 518 aaKnown RBP9.9□□□□□ -0.82
CHFR-219ENST00000541341 POLE4Q9NR33 117 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 RAD18Q9NS91 495 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 FBXL12Q9NXK8 326 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SH3BP4Q9P0V3 963 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 FAM8A1Q9UBU6 413 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 SLCO3A1Q9UIG8 710 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 FKBPLQ9UIM3 349 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ING4Q9UNL4 249 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ABCG2Q9UNQ0 655 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 MGAT4BQ9UQ53 548 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 ANGPT4Q9Y264 503 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 KLHL20Q9Y2M5 609 aa9.9□□□□□ -0.82
CHFR-219ENST00000541341 TRBV5-4A0A0C4DH59 114 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 A0A1B0GTL3 188 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 HYKKA2RU49 373 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 FABP12A6NFH5 140 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 RNASET2O00584 256 aaKnown RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 CCL22O00626 93 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SHOXO15266 292 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 PDPK1O15530 556 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SGTAO43765 313 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 PRKYO43930 277 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 SOCS5O75159 536 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 MYCLP1P12525 358 aaPredicted RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 JUPP14923 745 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 GNSP15586 552 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 PRKCAP17252 672 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 AMD1P17707 334 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 GTF2E2P29084 291 aaKnown RBP9.89□□□□□ -0.83
CHFR-219ENST00000541341 PTPN6P29350 595 aa9.89□□□□□ -0.83
CHFR-219ENST00000541341 CD70P32970 193 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms