RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TBCDQ9BTW9 1192 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 BDH2Q9BUT1 245 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 DUSP26Q9BV47 211 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 DDA1Q9BW61 102 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 NLNQ9BYT8 704 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.91□□□□□ -1.14
CHD4-208ENST00000540960 ASPSCR1Q9BZE9 553 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 ACTL8Q9H568 366 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 MAGIXQ9H6Y5 334 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 FGF22Q9HCT0 170 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 NEUROD4Q9HD90 331 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 MIEF1Q9NQG6 463 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 EHD3Q9NZN3 535 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 NKX1-2Q9UD57 310 aaPredicted RBP7.91□□□□□ -1.14
CHD4-208ENST00000540960 GIMAP2Q9UG22 337 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 RPS6KA6Q9UK32 745 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 PSME2Q9UL46 239 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 KCNK6Q9Y257 313 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 NTNG1Q9Y2I2 539 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 PRKAB1Q9Y478 270 aa7.91□□□□□ -1.14
CHD4-208ENST00000540960 MXRA5Q9NR99 2828 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 LRP4O75096 1905 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 C2orf74A8MZ97 194 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 C19orf84I3L1E1 186 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 OR1F1O43749 312 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 DEAF1O75398 565 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 BMP2P12643 396 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 TCN1P20061 433 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 CD22P20273 847 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 RPL10P27635 214 aaKnown RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 IL12AP29459 219 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 GRIA3P42263 894 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 CCL11P51671 97 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 DGKQP52824 942 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 MAPK12P53778 367 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 MRPS22P82650 360 aaKnown RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 CHRNB3Q05901 458 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 FADDQ13158 208 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 BIRC2Q13490 618 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 VEZF1Q14119 521 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 CAPRIN1Q14444 709 aaKnown RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 CYP51A1Q16850 503 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 ZNF630Q2M218 657 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 AMZ1Q400G9 498 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 PAGE3Q5JUK9 113 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 CATSPEREQ5SY80 951 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 SUSD1Q6UWL2 747 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 COMMD6Q7Z4G1 85 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 ADCK2Q7Z695 626 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 GKN2Q86XP6 184 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 METTL25Q8N6Q8 603 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 MFSD9Q8NBP5 474 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 PAPD5Q8NDF8 572 aaKnown RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 HIPK4Q8NE63 616 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 OR52E1Q8NGJ3 308 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 GOT1L1Q8NHS2 421 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 ITLN2Q8WWU7 325 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 OR1E3Q8WZA6 343 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 EME1Q96AY2 570 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 MOAP1Q96BY2 351 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 SDCCAG3Q96C92 435 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 CENPNQ96H22 339 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 TEX37Q96LM6 180 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 PPM1MQ96MI6 270 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 KCNC2Q96PR1 638 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 C9orf16Q9BUW7 83 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 MS4A8Q9BY19 250 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 UCK1Q9HA47 277 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 SEMA3GQ9NS98 782 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 GIMAP4Q9NUV9 329 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 LYARQ9NX58 379 aaKnown RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 CMTM6Q9NX76 183 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 BAG5Q9UL15 447 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 RAB26Q9ULW5 256 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 SAMD4AQ9UPU9 718 aaKnown RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 DLGAP4Q9Y2H0 992 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 KLK4Q9Y5K2 254 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 KLF2Q9Y5W3 355 aaPredicted RBP7.9□□□□□ -1.14
CHD4-208ENST00000540960 SPACA6W5XKT8 324 aa7.9□□□□□ -1.14
CHD4-208ENST00000540960 A6NCN8 305 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TMEM247A6NEH6 219 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ISM1B1AKI9 464 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ARPC2O15144 300 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 NDUFS4O43181 175 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 PRAMEF4O60810 478 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 SOX30O94993 753 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 TGFB1P01137 390 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 CHRM5P08912 532 aaPredicted RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 SLC35G6P0C7Q6 338 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 RAP2AP10114 183 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 GGT1P19440 569 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 STAT5AP42229 794 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 ZFP36L2P47974 494 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 OR1D5P58170 312 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 CSNK1G2P78368 415 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 MRPS35P82673 323 aaKnown RBP7.89□□□□□ -1.15
CHD4-208ENST00000540960 MS4A2Q01362 244 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 C2orf80Q0P641 193 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 PDE7AQ13946 482 aa7.89□□□□□ -1.15
CHD4-208ENST00000540960 GNA13Q14344 377 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms