RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CDC26Q8NHZ8 85 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 GRHL3Q8TE85 626 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF721Q8TF20 911 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 C16orf78Q8WTQ4 265 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 KLHL29Q96CT2 875 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 C11orf24Q96F05 449 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-215ENST00000540904 FBXL20Q96IG2 436 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 PAIP2Q9BPZ3 127 aaKnown RBP8.58□□□□□ -1.04
SNHG1-215ENST00000540904 TUBB1Q9H4B7 451 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 KLHL1Q9NR64 748 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 LRFN1Q9P244 771 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 MYOTQ9UBF9 498 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 CES1P1Q9UKY3 287 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 PSME2Q9UL46 239 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 VPS4AQ9UN37 437 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 ERVK-19Q9WJR5 959 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 NTNG1Q9Y2I2 539 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 CCL27Q9Y4X3 112 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 POLR3HQ9Y535 204 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-215ENST00000540904 DNAJC15Q9Y5T4 150 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 SCN2AQ99250 2005 aa8.58□□□□□ -1.04
SNHG1-215ENST00000540904 DOCK10Q96BY6 2186 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM200CA6NKL6 621 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 PIP5K1BO14986 540 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 BIRC5O15392 142 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 RGS14O43566 566 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 SLC25A12O75746 678 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 NEURL1O76050 574 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 RASAL1O95294 804 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 HSPA4LO95757 839 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 IGKV3-11P04433 115 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 SERPINE1P05121 402 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 FGF4P08620 206 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CPMP14384 443 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 DRD2P14416 443 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CD46P15529 392 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CSNK2A2P19784 350 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-215ENST00000540904 NT5EP21589 574 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 ARRB2P32121 409 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CYB561P49447 251 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 HLCSP50747 726 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 SSR4P51571 173 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 HK2P52789 917 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 MAGOHP61326 146 aaKnown RBP8.57□□□□□ -1.04
SNHG1-215ENST00000540904 RNF4P78317 190 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF763Q0D2J5 394 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 HEPACAMQ14CZ8 416 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 NR6A1Q15406 480 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 MAPKAPK3Q16644 382 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 SPRED3Q2MJR0 410 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 C6orf163Q5TEZ5 329 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CES4AQ5XG92 561 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 NOXRED1Q6NXP6 359 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 FAM180AQ6UWF9 173 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 C9orf40Q8IXQ3 194 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CLYBLQ8N0X4 340 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM156Q8N614 296 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 MDS2Q8NDY4 140 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 OR5L2Q8NGL0 311 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 OR2T11Q8NH01 316 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 TWIST2Q8WVJ9 160 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 EXOSC8Q96B26 276 aaKnown RBP8.57□□□□□ -1.04
SNHG1-215ENST00000540904 ART5Q96L15 291 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 C5orf34Q96MH7 638 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 HES7Q9BYE0 225 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 CXorf21Q9HAI6 301 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 LRTM1Q9HBL6 345 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 PFDN4Q9NQP4 134 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 AGPAT4Q9NRZ5 378 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 C1orf109Q9NX04 203 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 HEY2Q9UBP5 337 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 UTS2RQ9UKP6 389 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 YARS2Q9Y2Z4 477 aaKnown RBP8.57□□□□□ -1.04
SNHG1-215ENST00000540904 ZNF780BQ9Y6R6 833 aa8.57□□□□□ -1.04
SNHG1-215ENST00000540904 TMEM120BA0PK00 339 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 C2orf72A6NCS6 295 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 A8MVJ9 347 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TCP11X1B4DZS4 312 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 LSM1O15116 133 aaKnown RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 ITM2AO43736 263 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 LYPLA1O75608 230 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 SP1P08047 785 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 DHRS4L1P0CG22 281 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 BGNP21810 368 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 GNLYP22749 145 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 SSTR4P31391 388 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 GALNSP34059 522 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 TRHRP34981 398 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 PTGER1P34995 402 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 GSTM5P46439 218 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 UQCRFS1P47985 274 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 SLC37A1P57057 533 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 PMP22Q01453 160 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 C2orf80Q0P641 193 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 MRPL49Q13405 166 aaKnown RBP8.56□□□□□ -1.04
SNHG1-215ENST00000540904 LTB4RQ15722 352 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 INAQ16352 499 aa8.56□□□□□ -1.04
SNHG1-215ENST00000540904 UGT3A2Q3SY77 523 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms