RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 HPCAL1P37235 193 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 RPL3P39023 403 aaKnown RBP14.46□□□□□ -0.09
DDB1-218ENST00000540784 IDH3AP50213 366 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 CLCN2P51788 898 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 AQP5P55064 265 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 DIO3P55073 304 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 CLDN8P56748 225 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 ZNF267Q14586 743 aaPredicted RBP14.46□□□□□ -0.09
DDB1-218ENST00000540784 C6orf163Q5TEZ5 329 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 AGAP7PQ5VUJ5 663 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 OGFOD2Q6N063 350 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 FAM180BQ6P0A1 224 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 ACAD11Q709F0 780 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 OR1N1Q8NGS0 311 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 ELP5Q8TE02 316 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 DOK4Q8TEW6 326 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 PPCDCQ96CD2 204 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 MTERF3Q96E29 417 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 VMP1Q96GC9 406 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 ABHD17AQ96GS6 310 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 SENP5Q96HI0 755 aaPredicted RBP14.46□□□□□ -0.09
DDB1-218ENST00000540784 MAELQ96JY0 434 aaKnown RBP14.46□□□□□ -0.09
DDB1-218ENST00000540784 ART5Q96L15 291 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 AGAP4Q96P64 663 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 PRPF18Q99633 342 aaKnown RBP14.46□□□□□ -0.09
DDB1-218ENST00000540784 OR8D2Q9GZM6 311 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 SH3BP4Q9P0V3 963 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 TUBD1Q9UJT1 453 aa14.46□□□□□ -0.09
DDB1-218ENST00000540784 PCDHGA9Q9Y5G4 932 aaKnown RBP14.46□□□□□ -0.09
DDB1-218ENST00000540784 TBX19O60806 448 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 DDAH2O95865 285 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 ALPPP05187 535 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 GPR143P51810 404 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 PTGR1Q14914 329 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 RPS6KA2Q15349 733 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 PRSS53Q2L4Q9 553 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 ANKRD26P1Q6NSI1 321 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 LRRC25Q8N386 305 aaPredicted RBP14.45□□□□□ -0.1
DDB1-218ENST00000540784 EXD3Q8N9H8 876 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 SLC2A12Q8TD20 617 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 BRIX1Q8TDN6 353 aaKnown RBP14.45□□□□□ -0.1
DDB1-218ENST00000540784 PSMF1Q92530 271 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 NCLNQ969V3 563 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 OR52B2Q96RD2 323 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 UBL7Q96S82 380 aaPredicted RBP14.45□□□□□ -0.1
DDB1-218ENST00000540784 NUDT9Q9BW91 350 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 DEFB126Q9BYW3 111 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 CCDC134Q9H6E4 229 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 ZNF552Q9H707 407 aaPredicted RBP14.45□□□□□ -0.1
DDB1-218ENST00000540784 CXorf21Q9HAI6 301 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 PTGFRNQ9P2B2 879 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 COPS7AQ9UBW8 275 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 ATP6V1HQ9UI12 483 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 MAPRE3Q9UPY8 281 aa14.45□□□□□ -0.1
DDB1-218ENST00000540784 MYO1GB0I1T2 1018 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 ZFAND5O76080 213 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 ATP1B1P05026 303 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 MAP4K2Q12851 820 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 SPRED3Q2MJR0 410 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 LSM12Q3MHD2 195 aaKnown RBP14.44□□□□□ -0.1
DDB1-218ENST00000540784 CRB2Q5IJ48 1285 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 CPTPQ5TA50 214 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 H3F3CQ6NXT2 135 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 ISLR2Q6UXK2 745 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 HSDL2Q6YN16 418 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 GALNT12Q8IXK2 581 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 SIRT6Q8N6T7 355 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 APCDD1LQ8NCL9 501 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 ZNF721Q8TF20 911 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 THOC1Q96FV9 657 aaKnown RBP14.44□□□□□ -0.1
DDB1-218ENST00000540784 ZNF764Q96H86 408 aaPredicted RBP14.44□□□□□ -0.1
DDB1-218ENST00000540784 FBXL20Q96IG2 436 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 ZNF354BQ96LW1 612 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 LMF1Q96S06 567 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 CCDC28BQ9BUN5 200 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 CNPPD1Q9BV87 410 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 DPY30Q9C005 99 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 BRINP2Q9C0B6 783 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 STMN3Q9NZ72 180 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 TEKT2Q9UIF3 430 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 CACNA1BQ00975 2339 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 EPG5Q9HCE0 2579 aa14.44□□□□□ -0.1
DDB1-218ENST00000540784 TRBV11-1A0A0K0K1C0 115 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 HRKO00198 91 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 SCAMP2O15127 329 aaKnown RBP14.43□□□□□ -0.1
DDB1-218ENST00000540784 UBDO15205 165 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 POLR3GO15318 223 aaPredicted RBP14.43□□□□□ -0.1
DDB1-218ENST00000540784 ALDOCP09972 364 aaKnown RBP14.43□□□□□ -0.1
DDB1-218ENST00000540784 NTSP30990 170 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 NCBP2P52298 156 aaKnown RBP eCLIP14.43□□□□□ -0.1
DDB1-218ENST00000540784 DUSP2Q05923 314 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 PDE7AQ13946 482 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 CEBPEQ15744 281 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 PRICKLE4Q2TBC4 344 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 PGS1Q32NB8 556 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 TCTN3Q6NUS6 607 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 RPS19BP1Q86WX3 136 aaKnown RBP14.43□□□□□ -0.1
DDB1-218ENST00000540784 RIMKLAQ8IXN7 391 aa14.43□□□□□ -0.1
DDB1-218ENST00000540784 SLC5A8Q8N695 610 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms