RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 EXOSC6Q5RKV6 272 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 ZNF627Q7L945 461 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SIAH3Q8IW03 269 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 OR52B4Q8NGK2 314 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 ISL2Q96A47 359 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 CDT1Q9H211 546 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 C3orf14Q9HBI5 128 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SLC27A6Q9Y2P4 619 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 NOP16Q9Y3C1 178 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 URADA6NGE7 173 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 CASTOR2A6NHX0 329 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 EEF1E1-BLOC1S5C9J1V9 151 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 LRRN3E7EW58 273 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SOX15O60248 233 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 MPZL2O60487 215 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SCGB1D2O95969 90 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 PRH1P02810 166 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 HTR2AP28223 471 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 ADNP2Q6IQ32 1131 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 CATSPERGQ6ZRH7 1159 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 MSANTD1Q6ZTZ1 278 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 BBS10Q8TAM1 723 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 LRRN3Q9H3W5 708 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SLC6A20Q9NP91 592 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 CFAP97Q9P2B7 532 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 TRBC2A0A5B9 178 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 TNFSF12O43508 249 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 SRPRAP08240 638 aaKnown RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 ARF4P18085 180 aaPredicted RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 OR1E1P30953 314 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 GGT2P36268 569 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 ABHD18Q0P651 414 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 SPATA2LQ8IUW3 424 aaPredicted RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 NKAPQ8N5F7 415 aaKnown RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 OR5T2Q8NGG2 359 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 PEX11GQ96HA9 241 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 PPP1R16AQ96I34 528 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 FAIM2Q9BWQ8 316 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 EQTNQ9NQ60 294 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 FBXO10Q9UK96 956 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 A0A1B0GVI7 797 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 RHPN2P1A8MT19 583 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 GPR31O00270 319 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 CYTIPO60759 359 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 IFNW1P05000 195 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 RPS26P62854 115 aaKnown RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 C10orf120Q5SQS8 335 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 IER5Q5VY09 327 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 KIAA1841Q6NSI8 718 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 GPR155Q7Z3F1 870 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 TSPAN33Q86UF1 283 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 MFFQ9GZY8 342 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 WDR26Q9H7D7 661 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 SCP2D1Q9UJQ7 156 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 A0A1B0GTL3 188 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 VLDLRP98155 873 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 PLBD1Q6P4A8 553 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 CEACAM19Q7Z692 300 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 ISCA2Q86U28 154 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 CILP2Q8IUL8 1156 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 RDH10Q8IZV5 341 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 OR14K1Q8NGZ2 314 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 HMCESQ96FZ2 354 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 TOE1Q96GM8 510 aaKnown RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 STYXL1Q9Y6J8 313 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 D6RAR5 112 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 GPR182O15218 404 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 EDN3P14138 238 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 AIF1P55008 147 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 ERVPABLB-1P60509 514 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 PLAG1Q6DJT9 500 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 IQCHQ86VS3 1027 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 CCDC117Q8IWD4 279 aaPredicted RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 CRYBG2Q8N1P7 616 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 SVBPQ8N300 66 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 OR8J3Q8NGG0 315 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 OR52H1Q8NGJ2 320 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 DPYSL5Q9BPU6 564 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 PIGQQ9BRB3 760 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 AARSD1Q9BTE6 412 aaKnown RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 SDR39U1Q9NRG7 319 aaPredicted RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 F5H5P2 479 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 GMFGO60234 142 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 SLC43A1O75387 559 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 HOXD4P09016 255 aaPredicted RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 BCKDHAP12694 445 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 CDKN1CP49918 316 aaPredicted RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 HSPB3Q12988 150 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 SIRPB2Q5JXA9 342 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 WSCD1Q658N2 575 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 TRMT11Q7Z4G4 463 aaKnown RBP10.59□□□□□ -0.71
PBX1-212ENST00000540236 OR11H7Q8NGC8 314 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 MAP3K3Q99759 626 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 EMC7Q9NPA0 242 aa10.59□□□□□ -0.71
PBX1-212ENST00000540236 WASF3Q9UPY6 502 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms