RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 DNAJC15Q9Y5T4 150 aa16.99■□□□□ 0.31
SNRPA1-203ENST00000540017 GNG14A0A1W2PPG7 69 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 WWP2O00308 870 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 FCHO1O14526 889 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 FGF4P08620 206 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 CPMP14384 443 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 GALNSP34059 522 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 PTGER1P34995 402 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 SERPINB4P48594 390 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 ALDH9A1P49189 494 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 CYB561P49447 251 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 ERVK-8P63133 956 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 PMP22Q01453 160 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 IMPG1Q17R60 797 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 SPRED3Q2MJR0 410 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 ZNF324BQ6AW86 544 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 Q6ZSR9 355 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 ATCAYQ86WG3 371 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 OR2T11Q8NH01 316 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 SUN3Q8TAQ9 357 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 FAR1Q8WVX9 515 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 PELOQ9BRX2 385 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 CNPPD1Q9BV87 410 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 ERVK-19Q9WJR5 959 aa16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 YARS2Q9Y2Z4 477 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-203ENST00000540017 WDR91A4D1P6 747 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 ERAL1O75616 437 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 RSL1D1O76021 490 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 WISP2O76076 250 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 CBX6O95503 412 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 SP1P08047 785 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 ANXA4P09525 319 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 DHRS4L1P0CG22 281 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 SSTR4P31391 388 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 SOX18P35713 384 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 FEN1P39748 380 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 KIAA0040Q15053 153 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 FAM180AQ6UWF9 173 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 OR8K3Q8NH51 312 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 CNRIP1Q96F85 164 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 ZNF681Q96N22 645 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 RASL10BQ96S79 203 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 COPS7AQ9UBW8 275 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 TRAF6Q9Y4K3 522 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 POLR3HQ9Y535 204 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 PCDHGB6Q9Y5F9 930 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 ACTL7BQ9Y614 415 aa16.97■□□□□ 0.31
SNRPA1-203ENST00000540017 SLC25A12O75746 678 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 RASAL1O95294 804 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 LINC00032P0C843 101 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 PORP16435 677 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 S1PR1P21453 382 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 SSR4P51571 173 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 SLC37A1P57057 533 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 SRSF1Q07955 248 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 MGAT2Q10469 447 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 INAQ16352 499 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 PRSS53Q2L4Q9 553 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 SLC25A25Q6KCM7 469 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 GALNTL5Q7Z4T8 443 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 MDGA2Q7Z553 956 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 CROCCP2Q86T23 111 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 NUDCD3Q8IVD9 361 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 TMEM156Q8N614 296 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.96■□□□□ 0.317e-11■■■■□ 26.3
SNRPA1-203ENST00000540017 AGR3Q8TD06 166 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 KLHL29Q96CT2 875 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 ART5Q96L15 291 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 FAIM2Q9BWQ8 316 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 ZNF395Q9H8N7 513 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 KCNK9Q9NPC2 374 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 AGPAT4Q9NRZ5 378 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 ZDHHC2Q9UIJ5 367 aa16.96■□□□□ 0.31
SNRPA1-203ENST00000540017 NPIPB8E9PQR5 432 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 SLC28A1O00337 649 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 CDK2AP1O14519 115 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 TM9SF1O15321 606 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 ITM2AO43736 263 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 DYRK3O43781 588 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 LYPLA1O75608 230 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 OR6B1O95007 311 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 DRD2P14416 443 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 CD46P15529 392 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 NT5EP21589 574 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 PRPH2P23942 346 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 MST1P26927 711 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 SOX3P41225 446 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 FUT7Q11130 342 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 MAPKAPK3Q16644 382 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 NOXRED1Q6NXP6 359 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 FAM111BQ6SJ93 734 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 RNF165Q6ZSG1 346 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 GALNT12Q8IXK2 581 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 CLYBLQ8N0X4 340 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 HORMAD2Q8N7B1 307 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 BCORP1Q8N888 145 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 SIMC1Q8NDZ2 872 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 TWIST2Q8WVJ9 160 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 C5orf34Q96MH7 638 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms