RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 BANPQ8N9N5 519 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 HUS1BQ8NHY5 278 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 SMIM10Q96HG1 83 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 KCNC2Q96PR1 638 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 NPLQ9BXD5 320 aaPredicted RBP13.86□□□□□ -0.19
USB1-203ENST00000539737 KCNJ16Q9NPI9 418 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 DMRT3Q9NQL9 472 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 PRDM9Q9NQV7 894 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 KCMF1Q9P0J7 381 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 TRPS1Q9UHF7 1281 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 FBXW2Q9UKT8 454 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 RNF11Q9Y3C5 154 aa13.86□□□□□ -0.19
USB1-203ENST00000539737 G3V2L1 256 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 FCHO1O14526 889 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 B3GALT2O43825 422 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 CPA3P15088 417 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 ADH7P40394 386 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 HNRNPFP52597 415 aaKnown RBP13.85□□□□□ -0.19
USB1-203ENST00000539737 PLA2G16P53816 162 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 LCP2Q13094 533 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 IFT88Q13099 833 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 UNC50Q53HI1 259 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 CEP85LQ5SZL2 805 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 KHDRBS2Q5VWX1 349 aaKnown RBP13.85□□□□□ -0.19
USB1-203ENST00000539737 TTC19Q6DKK2 380 aaPredicted RBP13.85□□□□□ -0.19
USB1-203ENST00000539737 ABHD17CQ6PCB6 329 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 MILR1Q7Z6M3 343 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 TGIF2LYQ8IUE0 185 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 TMEM52Q8NDY8 209 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 MYRIPQ8NFW9 859 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 OR4F6Q8NGB9 312 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 OR5M3Q8NGP4 307 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 RND1Q92730 232 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 TMEM125Q96AQ2 219 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 ZIM3Q96PE6 472 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 CDK15Q96Q40 435 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 SERINC2Q96SA4 455 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 ZNF382Q96SR6 550 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 GPATCH1Q9BRR8 931 aaKnown RBP13.85□□□□□ -0.19
USB1-203ENST00000539737 CNPPD1Q9BV87 410 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 DEFB126Q9BYW3 111 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 KLF13Q9Y2Y9 288 aaPredicted RBP13.85□□□□□ -0.19
USB1-203ENST00000539737 PLLPQ9Y342 182 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 MMACHCQ9Y4U1 282 aa13.85□□□□□ -0.19
USB1-203ENST00000539737 H3BQF6 201 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 FOXE1O00358 373 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 ITGA10O75578 1167 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 MYO1DO94832 1006 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 ZWINTO95229 277 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 TBX6O95947 436 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 HOXD4P09016 255 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 MYZAPP0CAP1 466 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 TRHRP34981 398 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 RAP1GDS1P52306 607 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 ARFIP1P53367 373 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 MTTPP55157 894 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 CDH13P55290 713 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 PKNOX1P55347 436 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 DNAJB13P59910 316 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 ASPHQ12797 758 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 BEND6Q5SZJ8 279 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 LIPMQ5VYY2 423 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 FRG2Q64ET8 278 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 RTL6Q6ICC9 239 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 ZNF585AQ6P3V2 769 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 GPRIN3Q6ZVF9 776 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 RPS27LQ71UM5 84 aaKnown RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 APCDD1LQ8NCL9 501 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 OR10Q1Q8NGQ4 319 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 WDR20Q8TBZ3 569 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 FRG2BQ96QU4 278 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 F2RL3Q96RI0 385 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 MTERF1Q99551 399 aaKnown RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 TBCDQ9BTW9 1192 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 STMN4Q9H169 189 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 ELOVL6Q9H5J4 265 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 TRIM45Q9H8W5 580 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 PNO1Q9NRX1 252 aaKnown RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 OXSMQ9NWU1 459 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 DNAJB12Q9NXW2 375 aaKnown RBP13.84□□□□□ -0.19
USB1-203ENST00000539737 PSD3Q9NYI0 1048 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 SNX6Q9UNH7 406 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 L3MBTL1Q9Y468 752 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 FAM215AQ9Y5M1 114 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 NCKAP5O14513 1909 aa13.84□□□□□ -0.19
USB1-203ENST00000539737 IGKV3D-11A0A0A0MRZ8 115 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 A0A0G2JNJ9 132 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 TCRBV16S1A1N1A0A5B0 115 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 OR6B1O95007 311 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 SCELO95171 688 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 TGFB1P01137 390 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 ENO1P06733 434 aaKnown RBP13.83□□□□□ -0.2
USB1-203ENST00000539737 PTX3P26022 381 aaPredicted RBP13.83□□□□□ -0.2
USB1-203ENST00000539737 SSR2P43308 183 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 WNT3P56703 355 aa13.83□□□□□ -0.2
USB1-203ENST00000539737 RPS13P62277 151 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms