RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	EHD3	Q9NZN3	535 aa		11.42	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CROCC	Q5TZA2	2017 aa		11.42	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MYO7B	Q6PIF6	2116 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PRKN	O60260	465 aa	Predicted RBP	11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	OR10H2	O60403	315 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TRIM13	O60858	407 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	OR2J2	O76002	312 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	F10	P00742	488 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	LDLR	P01130	860 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	UROS	P10746	265 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CPM	P14384	443 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	POR	P16435	677 aa	Predicted RBP	11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TSPAN8	P19075	237 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PRPH2	P23942	346 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SERPINB5	P36952	375 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	NAGLU	P54802	743 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC37A1	P57057	533 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ALDH6A1	Q02252	535 aa	Known RBP	11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ACSM2A	Q08AH3	577 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	IFFO1	Q0D2I5	559 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MAP4K2	Q12851	820 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MAPKAPK3	Q16644	382 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CFAP157	Q5JU67	520 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ACSM2B	Q68CK6	577 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MTFR2	Q6P444	385 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828		Q6ZPB1	254 aa	Predicted RBP	11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC29A4	Q7RTT9	530 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SIAH3	Q8IW03	269 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CCNYL1	Q8N7R7	359 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PRR7	Q8TB68	274 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLC22A8	Q8TCC7	542 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ACPT	Q9BZG2	426 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	IQCG	Q9H095	443 aa	Known RBP	11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MID1IP1	Q9NPA3	183 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TEX10	Q9NXF1	929 aa	Predicted RBP	11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SEC14L3	Q9UDX4	400 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CFL2	Q9Y281	166 aa		11.41	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PGRMC2	O15173	223 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SEMA7A	O75326	666 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	RSL1D1	O76021	490 aa	Known RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SLITRK5	O94991	958 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	FGF4	P08620	206 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	GP1BB	P13224	206 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CSNK2A2	P19784	350 aa	Predicted RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	MST1	P26927	711 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	XK	P51811	444 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PSPH	P78330	225 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ID2	Q02363	134 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	HEPACAM	Q14CZ8	416 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CEBPE	Q15744	281 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	HYAL4	Q2M3T9	481 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SGO1	Q5FBB7	561 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	C6orf163	Q5TEZ5	329 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	GFRAL	Q6UXV0	394 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	RNF111	Q6ZNA4	994 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	RTL4	Q6ZR62	310 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	OR4N5	Q8IXE1	308 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	GALNT12	Q8IXK2	581 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	C9orf40	Q8IXQ3	194 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	GHDC	Q8N2G8	530 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	C1orf52	Q8N6N3	182 aa	Known RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PSD4	Q8NDX1	1056 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ZNF675	Q8TD23	568 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SREK1	Q8WXA9	508 aa	Known RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	CTHRC1	Q96CG8	243 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ZNF764	Q96H86	408 aa	Predicted RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SECISBP2	Q96T21	854 aa	Known RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	PARD6B	Q9BYG5	372 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	SSU72	Q9NP77	194 aa	Known RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	KLHL1	Q9NR64	748 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ANKRD10	Q9NXR5	420 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	TAS2R7	Q9NYW3	318 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ERVK-11	Q9UQG0	969 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	ZNF835	Q9Y2P0	537 aa		11.4	□□□□□ -0.58
CLTCL1-205	ENST00000538828	DNAJC13	O75165	2243 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	TLDC2	A0PJX2	215 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ANKRD33B	A6NCL7	494 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SMIM23	A6NLE4	172 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	CAPN14	A8MX76	684 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	UBFD1	O14562	309 aa	Known RBP	11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ASNA1	O43681	348 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	PEX1	O43933	1283 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	NPHS1	O60500	1241 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	BCAS2	O75934	225 aa	Predicted RBP	11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ZIC2	O95409	532 aa	Predicted RBP	11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	GBA	P04062	536 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	IFI6	P09912	130 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	NEFH	P12036	1026 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ZNF24	P17028	368 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	NAGA	P17050	411 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	CNR1	P21554	472 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	TIA1	P31483	386 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	DEK	P35659	375 aa	Known RBP	11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	SOX3	P41225	446 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ERVK-8	P63133	956 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	ZNF267	Q14586	743 aa	Predicted RBP	11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	PCLAF	Q15004	111 aa		11.39	□□□□□ -0.59
CLTCL1-205	ENST00000538828	EBP	Q15125	230 aa	Known RBP	11.39	□□□□□ -0.59

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