RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ACAT2Q9BWD1 397 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF700Q9H0M5 742 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 NOL11Q9H8H0 719 aaKnown RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 MANSC1Q9H8J5 431 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 LRTM1Q9HBL6 345 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TIMMDC1Q9NPL8 285 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 DMRT3Q9NQL9 472 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 AGPAT4Q9NRZ5 378 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM216Q9P0N5 145 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 MBD2Q9UBB5 411 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ANAPC2Q9UJX6 822 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 PILRAQ9UKJ1 303 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 SLC12A4Q9UP95 1085 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 MED16Q9Y2X0 877 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CLCA3PQ9Y6N3 262 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 A0A1W2PQ72 361 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 NCF1BA6NI72 391 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 NCF1CA8MVU1 366 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 B8ZZF3 427 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TP73O15350 636 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 SSX5O60225 188 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TSC22D2O75157 780 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 BANF1O75531 89 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 FUCA1P04066 466 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 IFNA16P05015 189 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CELA2BP08218 269 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 NCF1P14598 390 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CD46P15529 392 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 HIST1H1TP22492 207 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ECHS1P30084 290 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CSF2RBP32927 897 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 SLCO1A2P46721 670 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 GLRBP48167 497 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 GSSP48637 474 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 GFERP55789 205 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CARD18P57730 90 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CYP4F3Q08477 520 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF763Q0D2J5 394 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ELOAQ14241 798 aaKnown RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 LAPTM4AQ15012 233 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ZIC1Q15915 447 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 MEP1AQ16819 746 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 SPRED3Q2MJR0 410 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ADPRMQ3LIE5 342 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CYP27C1Q4G0S4 372 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CATSPEREQ5SY80 951 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 AAGABQ6PD74 315 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CDHR3Q6ZTQ4 885 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 PLEKHM3Q6ZWE6 761 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 DDIASQ8IXT1 998 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 CENPLQ8N0S6 344 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 PELI3Q8N2H9 469 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ENDOVQ8N8Q3 282 aaKnown RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 BHLHE22Q8NFJ8 381 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 OR7G3Q8NG95 312 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 OR56A1Q8NGH5 318 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 C9orf43Q8TAL5 461 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 FNDC8Q8TC99 324 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ACTRT2Q8TDY3 377 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TM4SF19Q96DZ7 209 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 FAM111AQ96PZ2 611 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 OR2A5Q96R48 311 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TM9SF2Q99805 663 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 DEFB126Q9BYW3 111 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 LHPPQ9H008 270 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 MYNNQ9NPC7 610 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 EXD2Q9NVH0 621 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ARMC1Q9NVT9 282 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 GID8Q9NWU2 228 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 SELENONQ9NZV5 590 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 C3orf18Q9UK00 162 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TRAF6Q9Y4K3 522 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 PSAT1Q9Y617 370 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 NFS1Q9Y697 457 aa3.38□□□□□ -1.87
PTPN22-211ENST00000538253 TRAV17A0A0B4J275 112 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 IGHV5-51A0A0C4DH38 117 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 RAB19A4D1S5 217 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CDC14CA4D256 554 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ANTXRLA6NF34 631 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ATP6V1G2-DDX39BF2Z307 99 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ACOX3O15254 700 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 NDUFA2O43678 99 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CAPN1P07384 714 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 HOXD4P09016 255 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SLC35E2P0CK97 266 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FGF3P11487 239 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FKBP2P26885 142 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TIA1P31483 386 aaKnown RBP eCLIP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 RORAP35398 523 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 HSPA13P48723 471 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 MAGOHP61326 146 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 EMX2Q04743 252 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ERV3-1Q14264 604 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GRB7Q14451 532 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 NKAIN2Q5VXU1 208 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GALNT18Q6P9A2 607 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ABHD17CQ6PCB6 329 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 Q6ZNX1 250 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms