RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PIGMQ9H3S5 423 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RERGLQ9H628 205 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 AKAP7Q9P0M2 348 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OTOFQ9HC10 1997 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SBF2Q86WG5 1849 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SUPT3HB4E1H0 165 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 GPR31O00270 319 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 PPEF2O14830 753 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SIGLEC5O15389 551 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 WISP3O95389 354 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RECKO95980 971 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 POMCP01189 267 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 GIPP09681 153 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 COX5BP10606 129 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 LCP1P13796 627 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 GCGRP47871 477 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SELENOPP49908 381 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 GZMMP51124 257 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 STARD6P59095 220 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ZP1P60852 638 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SIGLEC14Q08ET2 396 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MAD2L1Q13257 205 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RBBP7Q16576 425 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TTLL9Q3SXZ7 439 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CRTC2Q53ET0 693 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM207Q6UWW9 146 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM196AQ6ZSG2 479 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 USP30Q70CQ3 517 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TMUB2Q71RG4 321 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 DPPA2Q7Z7J5 298 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 LHFPL3Q86UP9 236 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SLITRK4Q8IW52 837 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 NLGN2Q8NFZ4 835 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OR10G2Q8NGC3 310 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM203Q969S6 136 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 C12orf66Q96MD2 445 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 HHIPQ96QV1 700 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 UBL7Q96S82 380 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MAP3K3Q99759 626 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ATF6BQ99941 703 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 VRK1Q99986 396 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MAPKAP1Q9BPZ7 522 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 DPY30Q9C005 99 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ARL6Q9H0F7 186 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TMPRSS5Q9H3S3 457 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MTG2Q9H4K7 406 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 KLHL31Q9H511 634 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 XKR8Q9H6D3 395 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 REEP4Q9H6H4 257 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TREX1Q9NSU2 369 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 AFF4Q9UHB7 1163 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 LAMP5Q9UJQ1 280 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 POLR3HQ9Y535 204 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 A0A1B0GTL3 188 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SMIM30A4D0T7 59 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 A8MVJ9 347 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 WASH3PC4AMC7 463 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TNFRSF11BO00300 401 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 STK25O00506 426 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ANXA9O76027 345 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 LY86O95711 162 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SAGP10523 405 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 KDELR2P33947 212 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TNFSF9P41273 254 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ILF3Q12906 894 aaKnown RBP eCLIP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 PRR5LQ6MZQ0 368 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 RPL13AP3Q6NVV1 102 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ZC3H14Q6PJT7 736 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 CRYBG2Q8N1P7 616 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF527Q8NB42 609 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 C11orf65Q8NCR3 313 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 BEST4Q8NFU0 473 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ORAI1Q96D31 301 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 C14orf144Q96I85 54 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 HSH2DQ96JZ2 352 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 OR52E6Q96RD3 313 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ATOH8Q96SQ7 321 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 CPPED1Q9BRF8 314 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 C7orf50Q9BRJ6 194 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 CHIAQ9BZP6 476 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC2A6Q9UGQ3 507 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 CLEC2DQ9UHP7 191 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 FEM1BQ9UK73 627 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 UBIAD1Q9Y5Z9 338 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 GREB1LQ9C091 1923 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 LY75O60449 1722 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF638Q14966 1978 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 TRBV5-3A0A0A0MS03 114 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 MEX3AA1L020 520 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 METTL21EPA6NDL7 271 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SUSD5O60279 629 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 OR1I1O60431 355 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 SCN2BO60939 215 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 ADRA2AP08913 450 aa8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 MUC1P15941 1255 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-202ENST00000537556 NDUFB7P17568 137 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms