RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 NME2P1O60361 137 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 TRIM13O60858 407 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 CHRNGP07510 517 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 IL3P08700 152 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 EDN3P14138 238 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 NME2P22392 152 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 SSTR4P31391 388 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 ARRB2P32121 409 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 SOX18P35713 384 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 FEN1P39748 380 aaKnown RBP12.2□□□□□ -0.46
PRKDC-206ENST00000536429 SOX3P41225 446 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 XKP51811 444 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 SPRED3Q2MJR0 410 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 FHL5Q5TD97 284 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 SLC48A1Q6P1K1 146 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 ZCCHC23Q6ZST2 131 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 CYP4Z2PQ8N1L4 340 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 TMEM156Q8N614 296 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 CPSF7Q8N684 471 aaKnown RBP12.2□□□□□ -0.46
PRKDC-206ENST00000536429 GBP7Q8N8V2 638 aaPredicted RBP12.2□□□□□ -0.46
PRKDC-206ENST00000536429 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 C11orf24Q96F05 449 aaPredicted RBP12.2□□□□□ -0.46
PRKDC-206ENST00000536429 FRMD6Q96NE9 622 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 ZIM3Q96PE6 472 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 IQCGQ9H095 443 aaKnown RBP12.2□□□□□ -0.46
PRKDC-206ENST00000536429 CXorf21Q9HAI6 301 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 NMRK1Q9NWW6 199 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 COPS7AQ9UBW8 275 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 MCM8Q9UJA3 840 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 YARS2Q9Y2Z4 477 aaKnown RBP12.2□□□□□ -0.46
PRKDC-206ENST00000536429 A0A0G2JMM0 328 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 A0A1W2PPB8 328 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 A0A1W2PRS3 328 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 SERTM1A2A2V5 107 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 KIR3DP1A8MWS1 328 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 TMEM233B4DJY2 109 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 ZNHIT1O43257 154 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 CRCPO75575 148 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 NADKO95544 446 aaPredicted RBP12.19□□□□□ -0.46
PRKDC-206ENST00000536429 CPMP14384 443 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 PIK3R1P27986 724 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 TIA1P31483 386 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRKDC-206ENST00000536429 RFC3P40938 356 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 ALDH9A1P49189 494 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 SLC37A1P57057 533 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 GPR85P60893 370 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 ASPHQ12797 758 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 BIKQ13323 160 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 PRSS53Q2L4Q9 553 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 IL20RBQ6UXL0 311 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 SULF2Q8IWU5 870 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 HORMAD2Q8N7B1 307 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 TMEM178AQ8NBL3 297 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 SIMC1Q8NDZ2 872 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 OR8K3Q8NH51 312 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 C16orf78Q8WTQ4 265 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 SMC6Q96SB8 1091 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 PELOQ9BRX2 385 aaKnown RBP12.19□□□□□ -0.46
PRKDC-206ENST00000536429 DEPPQ9NTK1 212 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 ERRFI1Q9UJM3 462 aaPredicted RBP12.19□□□□□ -0.46
PRKDC-206ENST00000536429 MID2Q9UJV3 735 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 OSGIN2Q9Y236 505 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 DLGAP4Q9Y2H0 992 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 FIS1Q9Y3D6 152 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 CCL27Q9Y4X3 112 aa12.19□□□□□ -0.46
PRKDC-206ENST00000536429 UTP20O75691 2785 aaKnown RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 C1orf226A1L170 272 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 PINLYPA6NC86 204 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 A8MVJ9 347 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 G3V3Y1 287 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ERAL1O75616 437 aaKnown RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 AGFG2O95081 481 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 UNC5CO95185 931 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 CRYABP02511 175 aaKnown RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 UROSP10746 265 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 S1PR1P21453 382 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 NT5EP21589 574 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 GALNSP34059 522 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ETV4P43268 484 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 TRA2BP62995 288 aaKnown RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ACSM2AQ08AH3 577 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 MGAT2Q10469 447 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 DUSP8Q13202 625 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ELOAQ14241 798 aaKnown RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 EBPQ15125 230 aaKnown RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 LTB4RQ15722 352 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 SPIN4Q56A73 249 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 PIGGQ5H8A4 983 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 SPDYAQ5MJ70 313 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ACSM2BQ68CK6 577 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 GALNT18Q6P9A2 607 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 FAM111BQ6SJ93 734 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 LYPD8Q6UX82 237 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 EXOC3L1Q86VI1 746 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 SIAH3Q8IW03 269 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 GALNT12Q8IXK2 581 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ADCY4Q8NFM4 1077 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms