RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PAOXQ6QHF9 649 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC22A16Q86VW1 577 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 IFT20Q8IY31 132 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 EID3Q8N140 333 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 CEP112Q8N8E3 955 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 SDCCAG3Q96C92 435 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 DMRTA2Q96SC8 542 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 TUBA8Q9NY65 449 aaPredicted RBP13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC12A4Q9UP95 1085 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 HRH3Q9Y5N1 445 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 LIPGQ9Y5X9 500 aa13.2□□□□□ -0.3
RTN3P1-201ENST00000536295 NPIPA2E9PIF3 369 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 NPIPA3F8WFD2 350 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 C19orf84I3L1E1 186 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 NADKO95544 446 aaPredicted RBP13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 OTCP00480 354 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 PDYNP01213 254 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 RHOXF2BP0C7M4 288 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC35E2P0CK97 266 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 PIK3R1P27986 724 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 GCAP28676 217 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 SSTR4P31391 388 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 MAGEA5P43359 124 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC37A1P57057 533 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 SPRED3Q2MJR0 410 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 ZNF791Q3KP31 576 aaPredicted RBP13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 GGTA1PQ4G0N0 100 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 PRAMEF20Q5VT98 475 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 LETMD1Q6P1Q0 360 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 RGS9BPQ6ZS82 235 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 PAGE2Q7Z2X7 111 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 TMEM251Q8N6I4 163 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 FAM13CQ8NE31 585 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 OR5M3Q8NGP4 307 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 TRPC4APQ8TEL6 797 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 PHF10Q8WUB8 498 aaKnown RBP13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 SELENOMQ8WWX9 145 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 SPACA9Q96E40 222 aaPredicted RBP13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 HBEGFQ99075 208 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 WWTR1Q9GZV5 400 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 ZDHHC11Q9H8X9 412 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 IL1RL2Q9HB29 575 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 AHSPQ9NZD4 102 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 GTF3C1Q12789 2109 aa13.19□□□□□ -0.3
RTN3P1-201ENST00000536295 NCOA6Q14686 2063 aaPredicted RBP13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 ATP6AP2A0A1C7CYW4 349 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 RIPK2O43353 540 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 ATP6AP2O75787 350 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 GLSO94925 669 aaPredicted RBP13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 OR4F21O95013 312 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 LRATO95237 230 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 CLPSP04118 112 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 ABHD2P08910 425 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 CELA3AP09093 270 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 FAM153BP0C7A2 387 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TAC1P20366 129 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 MAPK12P53778 367 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 FAM153CQ494X1 144 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC22A10Q63ZE4 541 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 LYPD8Q6UX82 237 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TMEM64Q6YI46 380 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TRMT10CQ7L0Y3 403 aaKnown RBP13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 COMMD6Q7Z4G1 85 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 GALNT12Q8IXK2 581 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 METTL4Q8N3J2 472 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 FAM109AQ8N4B1 249 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 RPRMLQ8N4K4 120 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TMEM151AQ8N4L1 468 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 MARVELD2Q8N4S9 558 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 SLC15A4Q8N697 577 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 OR10G3Q8NGC4 313 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 OR4K14Q8NGD5 310 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 OR5M9Q8NGP3 310 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 CA5BP1Q8WTZ4 195 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 SMC6Q96SB8 1091 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TMEM216Q9P0N5 145 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 SNX6Q9UNH7 406 aa13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.18□□□□□ -0.3
RTN3P1-201ENST00000536295 PCNX1Q96RV3 2341 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 C2orf92A0A1B0GVN3 265 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 OR6C76A6NM76 312 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 GOLGA8RI6L899 631 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 SUPT7LO94864 414 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 CT62P0C5K7 136 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 NT5EP21589 574 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 GALNSP34059 522 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 XKP51811 444 aa13.17□□□□□ -0.3
RTN3P1-201ENST00000536295 KCNJ2P63252 427 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms