RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 GPR65Q8IYL9 337 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ZNF567Q8N184 647 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OR2T12Q8NG77 320 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OR9A2Q8NGT5 310 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OR5K1Q8NHB7 308 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 DTD1Q8TEA8 209 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 GLYATL2Q8WU03 294 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 FBLIM1Q8WUP2 373 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 HTR3CQ8WXA8 447 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CRYGNQ8WXF5 182 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MYDGFQ969H8 173 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 GTPBP3Q969Y2 492 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 CPNE2Q96FN4 548 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 P2RY11Q96G91 374 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SENP5Q96HI0 755 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 ARL5BQ96KC2 179 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MS4A4EQ96PG1 132 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SLC38A2Q96QD8 506 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SIGLEC11Q96RL6 698 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 IL4I1Q96RQ9 567 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CGRRF1Q99675 332 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 GAL3ST1Q99999 423 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MARVELD1Q9BSK0 173 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 WNT5BQ9H1J7 359 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 HHATLQ9HCP6 504 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 DLL4Q9NR61 685 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LYARQ9NX58 379 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 FLRT1Q9NZU1 646 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 NDUFAF4Q9P032 175 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ACAD8Q9UKU7 415 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SLC6A5Q9Y345 797 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 COL1A2P08123 1366 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 A0A0A0MRY4 1105 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MEX3AA1L020 520 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 BCLAF3A2AJT9 711 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC9B1P1A6NJY1 282 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 UPK3BL1B0FP48 263 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 WASH3PC4AMC7 463 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KRBOX1C9JBD0 128 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 UPK3BL2E5RIL1 263 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 NEDD8-MDP1E9PL57 170 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 QSOX1O00391 747 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CXCR6O00574 342 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TNFRSF10BO14763 440 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TSPAN3O60637 253 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CCNDBP1O95273 360 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 IL33O95760 270 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 WDPCPO95876 746 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 IGFBP1P08833 259 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 UMPSP11172 480 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ANXA3P12429 323 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PRG2P13727 222 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 NPR2P20594 1047 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 STOMP27105 288 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 AQP1P29972 269 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 EIF1AXP47813 144 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 NPBWR1P48145 328 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 RORCP51449 518 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CLCN5P51795 746 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 POLR2JP52435 117 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 UBE2MP61081 183 aaKnown RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 ERV3-1Q14264 604 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TAF1AQ15573 450 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 TKFCQ3LXA3 575 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 UNC50Q53HI1 259 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 MEDAGQ5VYS4 303 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CAPN13Q6MZZ7 669 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 TMEM207Q6UWW9 146 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SLC39A5Q6ZMH5 540 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SSX6Q7RTT6 188 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KRT77Q7Z794 578 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 LUZP2Q86TE4 346 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SIAH1Q8IUQ4 282 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZDHHC21Q8IVQ6 265 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CCDC116Q8IYX3 515 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GPD1LQ8N335 351 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZNF383Q8NA42 475 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 TMEM161BQ8NDZ6 487 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 OR1M1Q8NGA1 313 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 SPATA22Q8NHS9 363 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 POC1BQ8TC44 478 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GCDHQ92947 438 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZDHHC12Q96GR4 267 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 FCRL1Q96LA6 429 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PIGQQ9BRB3 760 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 LRRC3Q9BY71 257 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 WDR11Q9BZH6 1224 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 ZNF436Q9C0F3 470 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 PIGUQ9H490 435 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CRLF2Q9HC73 371 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 CA10Q9NS85 328 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 PRMT7Q9NVM4 692 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 RCOR3Q9P2K3 495 aaPredicted RBP3.54□□□□□ -1.84
MCF2-210ENST00000536274 PSORS1C1Q9UIG5 152 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 NEUROG3Q9Y4Z2 214 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 KLK4Q9Y5K2 254 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 NUP205Q92621 2012 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 OR51F1A6NGY5 319 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 DBX1A6NMT0 343 aa3.54□□□□□ -1.84
MCF2-210ENST00000536274 GABRR3A8MPY1 467 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms