RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ERN1O75460 977 aaKnown RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 ATP5HO75947 161 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 ZCCHC18P0CG32 403 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 C8orf89P0DMQ9 161 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 ZFP36L2P47974 494 aaKnown RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 MAP4K2Q12851 820 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 SF3A3Q12874 501 aaKnown RBP eCLIP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 ELAVL1Q15717 326 aaKnown RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 SPANXN4Q5MJ08 99 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 MFSD4BQ5TF39 518 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 FAM199XQ6PEV8 388 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 MARCH9Q86YJ5 346 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 RAB43Q86YS6 212 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 FITM2Q8N6M3 262 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 KDF1Q8NAX2 398 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 EXOSC8Q96B26 276 aaKnown RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 CNRIP1Q96F85 164 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 DGAT2Q96PD7 388 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 AKIRIN1Q9H9L7 192 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 GPN2Q9H9Y4 310 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-205ENST00000535927 EFCAB1Q9HAE3 211 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 SLC52A3Q9NQ40 469 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 TAS2R9Q9NYW1 312 aa15.22■□□□□ 0.03
VAMP1-205ENST00000535927 GLOD5A6NK44 160 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 TTC36A6NLP5 189 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 CCT8L1PA6NM43 557 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 OR10H2O60403 315 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 HNRNPCL1O60812 293 aaKnown RBP15.21■□□□□ 0.03
VAMP1-205ENST00000535927 LDB3O75112 727 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 COX4I1P13073 169 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 ICAM2P13598 275 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 NME5P56597 212 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 WNT3P56703 355 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 BTG2P78543 158 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 UBAP2LQ14157 1087 aaKnown RBP15.21■□□□□ 0.03
VAMP1-205ENST00000535927 SPRED3Q2MJR0 410 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 MMEL1Q495T6 779 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 TMEM64Q6YI46 380 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 LAPTM4BQ86VI4 370 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 MORN4Q8NDC4 146 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 TMEM52Q8NDY8 209 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 OR9I1Q8NGQ6 314 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 OR14A16Q8NHC5 309 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 ROPN1LQ96C74 230 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 SLC45A3Q96JT2 553 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 AMDHD1Q96NU7 426 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 C3orf14Q9HBI5 128 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.21■□□□□ 0.03
VAMP1-205ENST00000535927 GID8Q9NWU2 228 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 NDE1Q9NXR1 346 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 NTMQ9P121 344 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 PTGFRNQ9P2B2 879 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 TAGLN3Q9UI15 199 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 PPIEQ9UNP9 301 aaKnown RBP15.21■□□□□ 0.03
VAMP1-205ENST00000535927 CFL2Q9Y281 166 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 AP3M1Q9Y2T2 418 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 CLDN16Q9Y5I7 305 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 GMEB1Q9Y692 573 aa15.21■□□□□ 0.03
VAMP1-205ENST00000535927 DSPP15924 2871 aaKnown RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 TEX51A0A1B0GUA7 166 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 EBAG9O00559 213 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 PLOD3O60568 738 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CNOT3O75175 753 aaKnown RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 JRKO75564 520 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CREG1O75629 220 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CALB2P22676 271 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 PPIBP23284 216 aaKnown RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 NCBP2P52298 156 aaKnown RBP eCLIP15.2■□□□□ 0.027e-8■■■■■ 27.5
VAMP1-205ENST00000535927 ERV3-1Q14264 604 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 TLR1Q15399 786 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 VPS26BQ4G0F5 336 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 OR4F3Q6IEY1 312 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 HACD2Q6Y1H2 254 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CPEB2Q7Z5Q1 589 aaKnown RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CCDC116Q8IYX3 515 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 OR7G1Q8NGA0 311 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 SFXN5Q8TD22 340 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 RIT1Q92963 219 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CTHRC1Q96CG8 243 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 NSL1Q96IY1 281 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 LPAR4Q99677 370 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 GLIPR2Q9H4G4 154 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CCDC86Q9H6F5 360 aaKnown RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 SOX17Q9H6I2 414 aaPredicted RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 NECTIN3Q9NQS3 549 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.2■□□□□ 0.02
VAMP1-205ENST00000535927 ARMCX1Q9P291 453 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 CLCA3PQ9Y6N3 262 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 AKAP13Q12802 2813 aa15.2■□□□□ 0.02
VAMP1-205ENST00000535927 A0A096LPI6 279 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 LOC101059948A0A1B0GTJ6 334 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 NR5A2O00482 541 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 RFXANKO14593 260 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 CDC123O75794 336 aaPredicted RBP15.19■□□□□ 0.02
VAMP1-205ENST00000535927 KCNH1O95259 989 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 IFNA16P05015 189 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 MAOAP21397 527 aa15.19■□□□□ 0.02
VAMP1-205ENST00000535927 FEN1P39748 380 aaKnown RBP15.19■□□□□ 0.02
VAMP1-205ENST00000535927 RASSF2P50749 326 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms