RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 ELOAQ14241 798 aaKnown RBP20.35■□□□□ 0.85
SSPN-204ENST00000535504 OR1C1Q15619 314 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 ZNF766Q5HY98 468 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 HLA-DQA1Q5Y7H0 255 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 RPUSD3Q6P087 351 aaKnown RBP20.35■□□□□ 0.85
SSPN-204ENST00000535504 TUBA3EQ6PEY2 450 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 CISD2Q8N5K1 135 aaKnown RBP20.35■□□□□ 0.85
SSPN-204ENST00000535504 Q8NA96 180 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 ASB15Q8WXK1 588 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 FBXL20Q96IG2 436 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 TMBIM4Q9HC24 238 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 RYDENQ9NUL5 291 aaKnown RBP20.35■□□□□ 0.85
SSPN-204ENST00000535504 ERVK-11Q9UQG0 969 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 TMED5Q9Y3A6 229 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 ITGA10O75578 1167 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 ERVK-8P63133 956 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 TRIM42Q8IWZ5 723 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 GPALPP1Q8IXQ4 340 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 BCORP1Q8N888 145 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 SLC22A8Q8TCC7 542 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 C16orf78Q8WTQ4 265 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 PPP3R2Q96LZ3 170 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 ANKRD10Q9NXR5 420 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 ERVK-19Q9WJR5 959 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 CFL2Q9Y281 166 aa20.34■□□□□ 0.85
SSPN-204ENST00000535504 POLR3HQ9Y535 204 aaPredicted RBP20.34■□□□□ 0.85
SSPN-204ENST00000535504 TMEM120BA0PK00 339 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 OR6C76A6NM76 312 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 A8MVJ9 347 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 RASAL1O95294 804 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 WISP1O95388 367 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 DDAH2O95865 285 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 CRYABP02511 175 aaKnown RBP20.33■□□□□ 0.85
SSPN-204ENST00000535504 LINC00032P0C843 101 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 PRPH2P23942 346 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 CD96P40200 585 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 GPR143P51810 404 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 ABCE1P61221 599 aaKnown RBP20.33■□□□□ 0.85
SSPN-204ENST00000535504 RNF4P78317 190 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 FOXK1P85037 733 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 IKBIPQ70UQ0 350 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 LRRC25Q8N386 305 aaPredicted RBP20.33■□□□□ 0.85
SSPN-204ENST00000535504 NUBPLQ8TB37 319 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 ZNF721Q8TF20 911 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 SNRNP40Q96DI7 357 aaKnown RBP20.33■□□□□ 0.85
SSPN-204ENST00000535504 BRINP2Q9C0B6 783 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 HPF1Q9NWY4 346 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 EHD3Q9NZN3 535 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 MYOTQ9UBF9 498 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 PCDHGB6Q9Y5F9 930 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 DNAJC15Q9Y5T4 150 aa20.33■□□□□ 0.85
SSPN-204ENST00000535504 FEN1P39748 380 aaKnown RBP20.32■□□□□ 0.84
SSPN-204ENST00000535504 HLCSP50747 726 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 KCNC4Q03721 635 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 C2orf80Q0P641 193 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 STX3Q13277 289 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 GALNTL6Q49A17 601 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 ATP6AP1LQ52LC2 224 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 AGBL2Q5U5Z8 902 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 NOXRED1Q6NXP6 359 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 OPN5Q6U736 354 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 CYP4Z2PQ8N1L4 340 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 GALNT11Q8NCW6 608 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 MGARPQ8TDB4 240 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 MIB2Q96AX9 1013 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 EXOSC8Q96B26 276 aaKnown RBP20.32■□□□□ 0.84
SSPN-204ENST00000535504 BBS4Q96RK4 519 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 GAL3ST4Q96RP7 486 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 ACBD3Q9H3P7 528 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 TNFRSF12AQ9NP84 129 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 MYNNQ9NPC7 610 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 TIMMDC1Q9NPL8 285 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 CFAP46Q8IYW2 2715 aa20.32■□□□□ 0.84
SSPN-204ENST00000535504 SMG1Q96Q15 3661 aaKnown RBP20.31■□□□□ 0.84
SSPN-204ENST00000535504 NPIPB8E9PQR5 432 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 WWP2O00308 870 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 PIP5K1BO14986 540 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 SLC25A12O75746 678 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 OR2J2O76002 312 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 DDCP20711 480 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 NTSP30990 170 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 MPIP34949 423 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 TRHRP34981 398 aaPredicted RBP20.31■□□□□ 0.84
SSPN-204ENST00000535504 SLC18A1P54219 525 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 RPL38P63173 70 aaKnown RBP20.31■□□□□ 0.84
SSPN-204ENST00000535504 RAE1P78406 368 aaKnown RBP20.31■□□□□ 0.84
SSPN-204ENST00000535504 MAPKAPK3Q16644 382 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 FAM219BQ5XKK7 198 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 ATG16L1Q676U5 607 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 SLC25A25Q6KCM7 469 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 TAGAPQ8N103 731 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 ARMC10Q8N2F6 343 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 AMER2Q8N7J2 671 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 OR7G1Q8NGA0 311 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 NPAS2Q99743 824 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 CXorf21Q9HAI6 301 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 KLHL1Q9NR64 748 aa20.31■□□□□ 0.84
SSPN-204ENST00000535504 ZNF223Q9UK11 482 aaPredicted RBP20.31■□□□□ 0.84
SSPN-204ENST00000535504 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.31■□□□□ 0.84
SSPN-204ENST00000535504 KLF13Q9Y2Y9 288 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms