RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SYNPOQ8N3V7 929 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CELF5Q8N6W0 485 aaKnown RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 OR10A6Q8NH74 314 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GATAD2BQ8WXI9 593 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 WDR77Q9BQA1 342 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 BCL2L14Q9BZR8 327 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 NANSQ9NR45 359 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 TAS2R16Q9NYV7 291 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 TRPS1Q9UHF7 1281 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF639Q9UID6 485 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PCOLCE2Q9UKZ9 415 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 A0A1W2PPL8 197 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 OR2AG2A6NM03 316 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 OR5K4A6NMS3 321 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 B3GALT4O96024 378 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ALPLP05186 524 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 STSP08842 583 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 GJA4P35212 333 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PPM1FP49593 454 aaPredicted RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TOMM20Q15388 145 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 FUNDC1Q8IVP5 155 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CYP4Z2PQ8N1L4 340 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SMARCD2Q92925 531 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 KIAA1191Q96A73 305 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ROPN1LQ96C74 230 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ERVK-19Q9WJR5 959 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 NCKAP1Q9Y2A7 1128 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SAMHD1Q9Y3Z3 626 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF451Q9Y4E5 1061 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 H3BQ06 376 aaPredicted RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PIP5K1BO14986 540 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SCAMP2O15127 329 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SLC22A2O15244 555 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SOCS5O75159 536 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SIX6O95475 246 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 C1QBP02746 253 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 LBPP18428 481 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 MEOX2P50222 304 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TAS2R38P59533 333 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 DNAJB13P59910 316 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ERVPABLB-1P60509 514 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CACNG1Q06432 222 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CRYZQ08257 329 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 C9orf152Q5JTZ5 239 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 HES5Q5TA89 166 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ALKAL2Q6UX46 152 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TPRG1Q6ZUI0 275 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 GPR149Q86SP6 731 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PM20D2Q8IYS1 436 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 NXPE1Q8N323 547 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 OR4M2Q8NGB6 313 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SKA2Q8WVK7 121 aaPredicted RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 KLHL6Q8WZ60 621 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SGK3Q96BR1 496 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 L3HYPDHQ96EM0 354 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 LGR4Q9BXB1 951 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CPEB1Q9BZB8 566 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 QRSL1Q9H0R6 528 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TM7SF3Q9NS93 570 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 C2orf42Q9NWW7 574 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SLC39A1Q9NY26 324 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CD300AQ9UGN4 299 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PCTPQ9UKL6 214 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TBC1D24Q9ULP9 559 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ASB4Q9Y574 426 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TCRBV16S1A1N1A0A5B0 115 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CCDC85CA6NKD9 419 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 B4DXG7 233 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PTP4A3O75365 173 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 HMGN1P05114 100 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SERPINA4P29622 427 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 PDHA2P29803 388 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 MAN2A2P49641 1150 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 UGT2B15P54855 530 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 GABARAPL2P60520 117 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 SNRPD1P62314 119 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ELP6Q0PNE2 266 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 FCN2Q15485 313 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 USP39Q53GS9 565 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 LCN8Q6JVE9 175 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 OR2T12Q8NG77 320 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF675Q8TD23 568 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 ISG20Q96AZ6 181 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 OTUB1Q96FW1 271 aaPredicted RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TPD52L3Q96J77 140 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 QRFPRQ96P65 431 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 KCNC2Q96PR1 638 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 OR2A14Q96R47 310 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 DCLRE1CQ96SD1 692 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 RIOK2Q9BVS4 552 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 DERL2Q9GZP9 239 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 CARS2Q9HA77 564 aaKnown RBP8.6□□□□□ -1.03
SF3B2-216ENST00000534765 POLG2Q9UHN1 485 aa8.6□□□□□ -1.03
SF3B2-216ENST00000534765 TRPM6Q9BX84 2022 aa8.59□□□□□ -1.03
SF3B2-216ENST00000534765 A0A1W2PP18 115 aa8.59□□□□□ -1.03
SF3B2-216ENST00000534765 NARSO43776 548 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms