RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ST13P4Q8IZP2 240 aaPredicted RBP13.05□□□□□ -0.32
VPS11-205ENST00000534551 Q8NA96 180 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
VPS11-205ENST00000534551 CATSPER1Q8NEC5 780 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 ADCY4Q8NFM4 1077 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 OR4K14Q8NGD5 310 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.05□□□□□ -0.32
VPS11-205ENST00000534551 ZNF721Q8TF20 911 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 ZNF75CPQ92670 426 aaPredicted RBP13.05□□□□□ -0.32
VPS11-205ENST00000534551 TUBGCP3Q96CW5 907 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 ZNF681Q96N22 645 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 ANKRA2Q9H9E1 313 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 SLCO1B3Q9NPD5 702 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 PFDN4Q9NQP4 134 aa13.05□□□□□ -0.32
VPS11-205ENST00000534551 TMEM200CA6NKL6 621 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 GUCY1B2O75343 617 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 WDPCPO95876 746 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 SFTPCP11686 197 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 ICAM2P13598 275 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 EFNA1P20827 205 aaPredicted RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 SOX18P35713 384 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 CLCN2P51788 898 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 MRPS35P82673 323 aaKnown RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 DUSP8Q13202 625 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 ZNF267Q14586 743 aaPredicted RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 PTGR1Q14914 329 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 SPRED3Q2MJR0 410 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 ATP6AP1LQ52LC2 224 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 C6orf136Q5SQH8 315 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 H3F3CQ6NXT2 135 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 JMJD6Q6NYC1 403 aaPredicted RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 FAM111BQ6SJ93 734 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 IGFL2Q6UWQ7 119 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 C9orf40Q8IXQ3 194 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 TMEM132CQ8N3T6 1108 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 LIX1Q8N485 282 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 FNDC5Q8NAU1 212 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 OR1N1Q8NGS0 311 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 OR9A2Q8NGT5 310 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 DAZLQ92904 295 aaKnown RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 RIT1Q92963 219 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 CIDECQ96AQ7 238 aaPredicted RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 FBXL20Q96IG2 436 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 PPP3R2Q96LZ3 170 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 CCT7Q99832 543 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 TRIM4Q9C037 500 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 BRINP2Q9C0B6 783 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 EPS8L2Q9H6S3 715 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 SLAMF7Q9NQ25 335 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 THAP1Q9NVV9 213 aa13.04□□□□□ -0.32
VPS11-205ENST00000534551 PPIEQ9UNP9 301 aaKnown RBP13.04□□□□□ -0.32
VPS11-205ENST00000534551 NUP214P35658 2090 aaPredicted RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 GOLGA8QA0A0J9YX86 632 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 GOLGA8OA6NCC3 632 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 GABRR3A8MPY1 467 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 GOLGA8NF8WBI6 632 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 SDHDO14521 159 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 ZNF354AO60765 605 aaPredicted RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 SLC35E2P0CK97 266 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 BCKDHAP12694 445 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 COX7A2P14406 83 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 DDCP20711 480 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 ARG2P78540 354 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 SRSF11Q05519 484 aaKnown RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 KLRB1Q12918 225 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 EXOSC7Q15024 291 aaKnown RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 ABHD17BQ5VST6 288 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 ATG16L1Q676U5 607 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 GALNT12Q8IXK2 581 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 SLC5A8Q8N695 610 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 TEX19Q8NA77 164 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 MORN4Q8NDC4 146 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 SUN3Q8TAQ9 357 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 DYDC1Q8WWB3 177 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 GAL3ST4Q96RP7 486 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 HES7Q9BYE0 225 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 DEFB126Q9BYW3 111 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 EPN3Q9H201 632 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 WDR55Q9H6Y2 383 aaPredicted RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 AKTIPQ9H8T0 292 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 CXorf21Q9HAI6 301 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 INTS9Q9NV88 658 aaKnown RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 MAT2BQ9NZL9 334 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 ENTPD4Q9Y227 616 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 DTX4Q9Y2E6 619 aa13.03□□□□□ -0.32
VPS11-205ENST00000534551 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.03□□□□□ -0.32
VPS11-205ENST00000534551 WWP2O00308 870 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 DPM1O60762 260 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 DRD2P14416 443 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms